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Registros recuperados : 19 | |
4. | | CARRACELAS, B.; NAVAJAS, E.; VERA, B.; CIAPPESONI, G. Estudio de asociación de genoma completo para resistencia genética a nematodos gastrointestinales en ovinos Corriedale. [abstract]. In: AUPA, Proceedings del VII Congreso Uruguayo de Producción Animal. Sección Una Sola Salud (Single Health Section), 14 y 15 diciembre 2021. Archivos Latinoamericanos de Producción Animal, 29(Supl.1), p.96. (Archivos Latinoamericanos de Producción Animal, Vol.29, Supl.1) Corresponding author: B. Carracelas, Instituto Nacional de Investigación Agropecuaria (INIA), Ruta 48 Km 10, Las Brujas, Uruguay, mailto: bcarracelas@inia.org.uyBiblioteca(s): INIA Las Brujas. |
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7. | | CARRACELAS, B.; NAVAJAS, E.; VERA, B.; CIAPPESONI, G. SNP arrays evaluation as tools in genetic improvement in Corriedale sheep in Uruguay. [Evaluación de paneles de SNP como herramientas en la mejora genética de ovinos Corriedale en Uruguay]. [Avaliação de painéis de SNP como ferramentas em melhoramento genético de ovinos Corriedale no Uruguai]. Animal production and pastures. Agrociencia Uruguay, 2022, vol. 26, number 2, article e998. doi: https://doi.org/10.31285/AGRO.26.998 Article history: Received 09 Feb 2022; Accepted 30 May 2022; Published 19 Aug 2022. Editor: Mariana Carriquiry, Universidad de la República, Facultad de Agronomía, Montevideo, Uruguay. Correspondence: Beatriz Carracelas,...Biblioteca(s): INIA Las Brujas. |
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8. | | VERA, B.; DE BARBIERI, I.; FERREIRA, G.; NAVAJAS, E.; CARRACELAS, B.; CIAPPESONI, G. Asignación de parentesco y detección de superfecundación heteropaternal en ovinos Merino Australiano mediante paneles de SNP. In: AUPA, Proceedings del VII Congreso Uruguayo de Producción Animal. Sección Cambio Climático y Producción Sostenible (Climate Change Section), 14 y 15 diciembre 2021. Archivos Latinoamericanos de Producción Animal, 29(Supl.1), p.85-87. (Archivos Latinoamericanos de Producción Animal, Vol.29, Supl.1) Corresponding author: B. Vera, Instituto Nacional de Investigación Agropecuaria (INIA), Ruta 48 km 10, Las Brujas (Uruguay), mailto: bvera@inia.org.uyBiblioteca(s): INIA Las Brujas. |
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9. | | VERA, B.; NAVAJAS, E.; DE BARBIERI, I.; VAN LIER, E.; CIAPPESONI, G. Agroecological breeding: genomic evaluation in Australian Merico. [abstract]. In: REDBIO México 2022, XI Congreso, "Biotecnología productiva y sostenible". Libro de resúmenes. 12-14 octubre 2022, Yucatán, México. p.29 This project received funding from SMARTER Horizon 2020 number 772787, RUMIAR, CSIC I+D-2018-287.Biblioteca(s): INIA Las Brujas. |
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12. | | RAMOS, Z.; GARRICK , D. J.; BLAIR, H. T.; VERA, B.; CIAPPESONI, G.; KENYON, P. R. Genomic regions associated with wool, growth and reproduction traits in Uruguayan Merino Sheep. Genes, 2023, volume 14, issue 1, article 167. OPEN ACCESS. doi: https://doi.org/10.3390/genes14010167 Article history: Received 13 December 2022; Revised 29 December 2022; Accepted 4 January 2023; Published 7 January 2023. -- Correspondence author: Zully Ramos, email: z.ramosalvez@massey.ac.nz -- Academic Editor: Qiuyue Liu -- This...Biblioteca(s): INIA Las Brujas. |
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14. | | VERA, B.; NAVAJAS, E.; DE BARBIERI, I.; VAN LIER, E.; CIAPPESONI, G. Predicciones genómicas para rasgos productivos y de valor ambiental en ovinos Merino Australiano. [resumen]. In: REDBIO México 2022, XI Congreso, "Biotecnología productiva y sostenible". Libro de resúmenes. 12-14 octubre 2022, Yucatán, México. p.122. Este trabajo fue parcialmente financiado por los proyectos SMARTER (772787), RUMIAR, GrassToGas, CSIC I+D-2018-287.Biblioteca(s): INIA Las Brujas. |
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15. | | VERA, B.; MONZALVO, C.; NAVAJAS, E.; DE BARBIERI, I.; CARRACELAS, B.; VAN LIER, E.; CIAPPESONI, G. Predicción del valor genético de ovinos en predios comerciales para emisión de metano, eficiencia de conversión y características productivas. Revista INIA Uruguay, Diciembre 2022, no.71, p. 34-37. (Revista INIA; 71)Biblioteca(s): INIA Treinta y Tres. |
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16. | | BLUMETTO, O.; DE BARBIERI, I.; NAVAJAS, E.; BAETHGEN, W.; VERA, B.; BECOÑA, G.; CIAPPESONI, G. Regenerative livestock farming in Uruguay. Montevideo (UY): INIA, 2023. 23 p. (INIA, Special Edition). Technical review: Ing. Agr. PhD Verónica Ciganda y DMV PhD Georgget Banchero. -- This publication derives from the research work of the Natural Resources, Production and Environment Area, within the framework of the Extensive Livestock...Biblioteca(s): INIA Las Brujas. |
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17. | | CIAPPESONI, G.; DE BARBIERI, I.; MONTOSSI, F.; RAMOS, Z.; GIMENO, D.; VERA, B.; GIONANNINI, N. PL-3 Pass, present and future of Merino in Argentina and Uruguay. [conference abstract]. Animal - science proceedings, March 2023, Volume 14, Issue 1, Pages 3-5. doi: https://doi.org/10.1016/j.anscip.2023.01.004 Article history: Available online 13 March 2023, Version of Record 13 March 2023. -- Corresponding author: Gabriel Ciappesoni Scarone. E-mail: gciappesoni@inia.org.uy --
Animal - science proceedings Volume 14, Contents: 10th...Biblioteca(s): INIA Las Brujas. |
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18. | | CIAPPESONI, G.; MARQUES, C. B.; NAVAJAS, E.; PERAZA, P.; CARRACELAS, B.; VERA, B.; VAN LIER, E.; DE BARBIERI, I.; SALADA, S.; MONZALVO, C.; CASTELLS, D. Breeding for sheep parasite resistance in extensive production systems in Uruguay: From phenotype to genotype. Advances in biotechnologies for improving livestock breeding and feeding. In: Viljoen, G., Garcia Podesta, M. & Boettcher, P. (eds). 2023. International Symposium on Sustainable Animal Production and Health - Current status and way forward. Vienna, Austria, 28 June to 2 July 2021. Rome, FAO. Pp.224-236. https://doi.org/978-92-5-137052-0Biblioteca(s): INIA Las Brujas. |
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19. | | NAVAJAS, E.; RAVAGNOLO, O.; DE BARBIERI, I.; PRAVIA, M.I.; AGUILAR, I.; LEMA, O.M.; VERA, B.; PERAZA, P.; MARQUES, C. B.; VELAZCO, J.I.; CIAPPESONI, G. Genetic selection of feed efficiency and methane emissions in sheep and cattle in Uruguay: progress and limitations. [29] Part 5 - Novel traits: environment and greenhouse gas- In: Proceedings of the World Congress on Genetics Applied to Livestock Production (WCGALP), 12., Rotterdam, the Netherlands, 3-8 July 2022. doi: https://doi.org/10.3920/978-90-8686-940-4_29 164-167. Article history: Published online: February 9, 2023. -- Corresponding author: E.A. Navajas, email: enavajas@inia.org.uy -- Acknowledgements: The authors acknowledge the funding organizations INIA, Agencia Nacional de Investigación e...Biblioteca(s): INIA Las Brujas. |
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Registros recuperados : 19 | |
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Registro completo
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Biblioteca (s) : |
INIA Las Brujas. |
Fecha actual : |
30/08/2022 |
Actualizado : |
30/08/2022 |
Tipo de producción científica : |
Artículos en Revistas Indexadas Internacionales |
Circulación / Nivel : |
Internacional - -- |
Autor : |
CARRACELAS, B.; NAVAJAS, E.; VERA, B.; CIAPPESONI, G. |
Afiliación : |
EMERITA BEATRIZ CARRACELAS MARQUEZ, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; ELLY ANA NAVAJAS VALENTINI, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; BRENDA VERA, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; CARLOS GABRIEL CIAPPESONI SCARONE, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay. |
Título : |
Genome-wide association study of parasite resistance to gastrointestinal nematodes in Corriedale sheep. |
Fecha de publicación : |
2022 |
Fuente / Imprenta : |
Genes, 2022, vol. 13, issue 9, 1548. OPEN ACCESS. doi: https://doi.org/10.3390/genes13091548 |
ISSN : |
e-ISSN 2073-4425 |
DOI : |
10.3390/genes13091548 |
Idioma : |
Inglés |
Notas : |
Article history: Received 25 May 2022; Revised 19 August 2022; Accepted 23 August 2022; Published 27 August 2022.
Correspondence: gciappesoni@inia.org.uy -- Academic Editor: Qiuyue Liu.
License: This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
This article belongs to the Collection Feature Papers in Animal Genetics and Genomics: https://www.mdpi.com/journal/genes/topical_collections/feature_paper_animal |
Contenido : |
ABSTRACT.- Selection of genetically resistant animals is one alternative to reduce the negative impact of gastrointestinal nematodes (GIN) on sheep production. The aim of this study was to identify genomic regions associated with GIN resistance in Corriedale sheep by single-step genome-wide association studies (ssGWAS) using 170, 507 and 50K single nucleotide polymorphisms (SNPs). Analysis included 19,547 lambs with faecal egg counts (FEC) records, a pedigree file of 40,056 animals and 454, 711 and 383 genotypes from 170, 507 and 50K SNPs, respectively. Genomic estimated breeding values (GEBV) were obtained with single-step genomic BLUP methodology (ssGBLUP), using a univariate animal model, which included contemporary group, type of birth and age of dam as class fixed effects and age at FEC recording as covariate. The SNP effects as wells as p-values were estimated with POSTGSF90 program. Significance level was defined by a chromosome-wise False Discovery Rate of 5%. Significant genomic regions were identified in chromosomes 1, 3, 12 and 19 with the 170 SNP set, in chromosomes 7, 12 and 24 using the 507 SNP chip and only in chromosome 7 with the 50K SNP chip. Candidate genes located in these regions, using Oar_v4.0 as reference genome, were TIMP3, TLR5, LEPR and TLR9 (170 SNPs), SYNDIG1L and MGRN1 (507 SNP chip) and INO80, TLN2, TSHR and EIF2AK4 (50K SNP chip). These results validate genomic regions associated with FEC previously identified in Corriedale and other breeds and report new candidate regions for further investigation. © 2022 by the authors. Licensee MDPI, Basel, Switzerland. MenosABSTRACT.- Selection of genetically resistant animals is one alternative to reduce the negative impact of gastrointestinal nematodes (GIN) on sheep production. The aim of this study was to identify genomic regions associated with GIN resistance in Corriedale sheep by single-step genome-wide association studies (ssGWAS) using 170, 507 and 50K single nucleotide polymorphisms (SNPs). Analysis included 19,547 lambs with faecal egg counts (FEC) records, a pedigree file of 40,056 animals and 454, 711 and 383 genotypes from 170, 507 and 50K SNPs, respectively. Genomic estimated breeding values (GEBV) were obtained with single-step genomic BLUP methodology (ssGBLUP), using a univariate animal model, which included contemporary group, type of birth and age of dam as class fixed effects and age at FEC recording as covariate. The SNP effects as wells as p-values were estimated with POSTGSF90 program. Significance level was defined by a chromosome-wise False Discovery Rate of 5%. Significant genomic regions were identified in chromosomes 1, 3, 12 and 19 with the 170 SNP set, in chromosomes 7, 12 and 24 using the 507 SNP chip and only in chromosome 7 with the 50K SNP chip. Candidate genes located in these regions, using Oar_v4.0 as reference genome, were TIMP3, TLR5, LEPR and TLR9 (170 SNPs), SYNDIG1L and MGRN1 (507 SNP chip) and INO80, TLN2, TSHR and EIF2AK4 (50K SNP chip). These results validate genomic regions associated with FEC previously identified in Corriedale and other breeds an... Presentar Todo |
Palabras claves : |
FEC; Genomic regions; SsGWAS. |
Asunto categoría : |
L01 Ganadería |
URL : |
http://www.ainfo.inia.uy/digital/bitstream/item/16636/1/genes-13-01548-v2.pdf
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Marc : |
LEADER 02850naa a2200229 a 4500 001 1063548 005 2022-08-30 008 2022 bl uuuu u00u1 u #d 022 $ae-ISSN 2073-4425 024 7 $a10.3390/genes13091548$2DOI 100 1 $aCARRACELAS, B. 245 $aGenome-wide association study of parasite resistance to gastrointestinal nematodes in Corriedale sheep.$h[electronic resource] 260 $c2022 500 $aArticle history: Received 25 May 2022; Revised 19 August 2022; Accepted 23 August 2022; Published 27 August 2022. Correspondence: gciappesoni@inia.org.uy -- Academic Editor: Qiuyue Liu. License: This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). This article belongs to the Collection Feature Papers in Animal Genetics and Genomics: https://www.mdpi.com/journal/genes/topical_collections/feature_paper_animal 520 $aABSTRACT.- Selection of genetically resistant animals is one alternative to reduce the negative impact of gastrointestinal nematodes (GIN) on sheep production. The aim of this study was to identify genomic regions associated with GIN resistance in Corriedale sheep by single-step genome-wide association studies (ssGWAS) using 170, 507 and 50K single nucleotide polymorphisms (SNPs). Analysis included 19,547 lambs with faecal egg counts (FEC) records, a pedigree file of 40,056 animals and 454, 711 and 383 genotypes from 170, 507 and 50K SNPs, respectively. Genomic estimated breeding values (GEBV) were obtained with single-step genomic BLUP methodology (ssGBLUP), using a univariate animal model, which included contemporary group, type of birth and age of dam as class fixed effects and age at FEC recording as covariate. The SNP effects as wells as p-values were estimated with POSTGSF90 program. Significance level was defined by a chromosome-wise False Discovery Rate of 5%. Significant genomic regions were identified in chromosomes 1, 3, 12 and 19 with the 170 SNP set, in chromosomes 7, 12 and 24 using the 507 SNP chip and only in chromosome 7 with the 50K SNP chip. Candidate genes located in these regions, using Oar_v4.0 as reference genome, were TIMP3, TLR5, LEPR and TLR9 (170 SNPs), SYNDIG1L and MGRN1 (507 SNP chip) and INO80, TLN2, TSHR and EIF2AK4 (50K SNP chip). These results validate genomic regions associated with FEC previously identified in Corriedale and other breeds and report new candidate regions for further investigation. © 2022 by the authors. Licensee MDPI, Basel, Switzerland. 653 $aFEC 653 $aGenomic regions 653 $aSsGWAS 700 1 $aNAVAJAS, E. 700 1 $aVERA, B. 700 1 $aCIAPPESONI, G. 773 $tGenes, 2022, vol. 13, issue 9, 1548. OPEN ACCESS. doi: https://doi.org/10.3390/genes13091548
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