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Biblioteca (s) : |
INIA Las Brujas; INIA Treinta y Tres. |
Fecha : |
22/07/2018 |
Actualizado : |
28/11/2018 |
Tipo de producción científica : |
Artículos en Revistas Indexadas Internacionales |
Autor : |
WEINROTH, M.D.; SCOTT, H.M.; NORBY, B.; LONERAGAN, G.H.; NOYES, N.R.; ROVIRA, P.J.; DOSTER, E.; YANG, X.; WOERNER, D.R.; MORLEY, P.S.; BELK, K.E. |
Afiliación : |
M.D. WEINROTH, Universidad de Colorado State (CSU)/ Department of Animal Science (Meat Program); H.M. SCOTT, Universidad de Texas A&M; B. NORBY, Universidad de Michigan State (MSU); G.H. LONERAGAN, Texas Tech University; N.R. NOYES, Universidad de Colorado State (CSU); PABLO JUAN ROVIRA SANZ, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; E. DOSTER, Universidad de Colorado State (CSU); X. YANG, Universidad de California Davis (UCD); D.R. WOERNER, Universidad de Colorado State (CSU)/ Department of Animal Science (Meat Program); P. S. MORLEY, Universidad de Colorado State (CSU); K. E. BELK, Universidad de Colorado State (CSU)/ Department of Animal Science (Meat Program). |
Título : |
Effects of ceftiofur and chlortetracycline on the resistomes of feedlot cattle. |
Fecha de publicación : |
2018 |
Fuente / Imprenta : |
Applied and Environmental Microbiology, July 2018, vol. 84, no.13, e00610-18. |
Descripción física : |
This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license. |
ISSN : |
0099-2240 |
DOI : |
10.1128/AEM.00610-18 |
Idioma : |
Inglés |
Notas : |
Article history: Received 15 March 2018. / Accepted 24 April 2018. / Accepted manuscript posted online 4 May 2018. OPEN ACCESS. |
Contenido : |
ABSTRACT.
Treatment of food-producing animals with antimicrobial drugs (AMD) is controversial because of concerns regarding promotion of antimicrobial resistance (AMR). To investigate this concern, resistance genes in metagenomic bovine fecal samples during a clinical trial were analyzed to assess the impacts of treatment on beef feedlot cattle resistomes. Four groups of cattle were exposed, using a 2-by-2 factorial design, to different regimens of antimicrobial treatment. Injections of ceftiofur crystalline- free acid (a third-generation cephalosporin) were used to treat all cattle in treatment pens or only a single animal, and either chlortetracycline was included in the feed of all cattle in a pen or the feed was untreated. On days 0 and 26, respectively, pre- and posttrial fecal samples were collected, and resistance genes were characterized using shotgun metagenomics. Treatment with ceftiofur was not associated with changes to ?-lactam resistance genes. However, cattle fed chlortetracycline had a significant increase in relative abundance of tetracycline resistance genes. There was also an increase of an AMR class not administered during the study, which is a possible indicator of coselection of resistance genes. Samples analyzed in this study had previously been evaluated by culture characterization (Escherichia coli and Salmonella) and quantitative PCR (qPCR) of metagenomic fecal DNA, which allowed comparison of results with this study. In the majority of samples, genes that were selectively enriched through culture and qPCR were not identified through shotgun metagenomic sequencing in this study, suggesting that changes previously documented did not reflect changes affecting the majority of bacterial genetic elements found in the predominant fecal resistome.
© 2018 American Society for Microbiology. MenosABSTRACT.
Treatment of food-producing animals with antimicrobial drugs (AMD) is controversial because of concerns regarding promotion of antimicrobial resistance (AMR). To investigate this concern, resistance genes in metagenomic bovine fecal samples during a clinical trial were analyzed to assess the impacts of treatment on beef feedlot cattle resistomes. Four groups of cattle were exposed, using a 2-by-2 factorial design, to different regimens of antimicrobial treatment. Injections of ceftiofur crystalline- free acid (a third-generation cephalosporin) were used to treat all cattle in treatment pens or only a single animal, and either chlortetracycline was included in the feed of all cattle in a pen or the feed was untreated. On days 0 and 26, respectively, pre- and posttrial fecal samples were collected, and resistance genes were characterized using shotgun metagenomics. Treatment with ceftiofur was not associated with changes to ?-lactam resistance genes. However, cattle fed chlortetracycline had a significant increase in relative abundance of tetracycline resistance genes. There was also an increase of an AMR class not administered during the study, which is a possible indicator of coselection of resistance genes. Samples analyzed in this study had previously been evaluated by culture characterization (Escherichia coli and Salmonella) and quantitative PCR (qPCR) of metagenomic fecal DNA, which allowed comparison of results with this study. In the majority of samples, gen... Presentar Todo |
Palabras claves : |
ANTIBIOTIC RESISTANCE; ANTIMICROBIAL AGENTS; CATTLE; METAGENOMICS; POSTANTIBIOTIC EFFECT. |
Thesagro : |
FEEDLOT. |
Asunto categoría : |
-- L02 Alimentación animal |
URL : |
http://www.ainfo.inia.uy/digital/bitstream/item/12027/1/e00610-18.full.pdf
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Marc : |
LEADER 03064naa a2200361 a 4500 001 1058828 005 2018-11-28 008 2018 bl uuuu u00u1 u #d 022 $a0099-2240 024 7 $a10.1128/AEM.00610-18$2DOI 100 1 $aWEINROTH, M.D. 245 $aEffects of ceftiofur and chlortetracycline on the resistomes of feedlot cattle.$h[electronic resource] 260 $c2018 300 $cThis is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license. 500 $aArticle history: Received 15 March 2018. / Accepted 24 April 2018. / Accepted manuscript posted online 4 May 2018. OPEN ACCESS. 520 $aABSTRACT. Treatment of food-producing animals with antimicrobial drugs (AMD) is controversial because of concerns regarding promotion of antimicrobial resistance (AMR). To investigate this concern, resistance genes in metagenomic bovine fecal samples during a clinical trial were analyzed to assess the impacts of treatment on beef feedlot cattle resistomes. Four groups of cattle were exposed, using a 2-by-2 factorial design, to different regimens of antimicrobial treatment. Injections of ceftiofur crystalline- free acid (a third-generation cephalosporin) were used to treat all cattle in treatment pens or only a single animal, and either chlortetracycline was included in the feed of all cattle in a pen or the feed was untreated. On days 0 and 26, respectively, pre- and posttrial fecal samples were collected, and resistance genes were characterized using shotgun metagenomics. Treatment with ceftiofur was not associated with changes to ?-lactam resistance genes. However, cattle fed chlortetracycline had a significant increase in relative abundance of tetracycline resistance genes. There was also an increase of an AMR class not administered during the study, which is a possible indicator of coselection of resistance genes. Samples analyzed in this study had previously been evaluated by culture characterization (Escherichia coli and Salmonella) and quantitative PCR (qPCR) of metagenomic fecal DNA, which allowed comparison of results with this study. In the majority of samples, genes that were selectively enriched through culture and qPCR were not identified through shotgun metagenomic sequencing in this study, suggesting that changes previously documented did not reflect changes affecting the majority of bacterial genetic elements found in the predominant fecal resistome. © 2018 American Society for Microbiology. 650 $aFEEDLOT 653 $aANTIBIOTIC RESISTANCE 653 $aANTIMICROBIAL AGENTS 653 $aCATTLE 653 $aMETAGENOMICS 653 $aPOSTANTIBIOTIC EFFECT 700 1 $aSCOTT, H.M. 700 1 $aNORBY, B. 700 1 $aLONERAGAN, G.H. 700 1 $aNOYES, N.R. 700 1 $aROVIRA, P.J. 700 1 $aDOSTER, E. 700 1 $aYANG, X. 700 1 $aWOERNER, D.R. 700 1 $aMORLEY, P.S. 700 1 $aBELK, K.E. 773 $tApplied and Environmental Microbiology, July 2018, vol. 84, no.13, e00610-18.
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INIA Las Brujas (LB) |
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Biblioteca (s) : |
INIA Las Brujas. |
Fecha actual : |
31/03/2021 |
Actualizado : |
31/03/2021 |
Tipo de producción científica : |
Trabajos en Congresos/Conferencias |
Autor : |
LOURENCO, D; MISZTAL, I.; TSURUTA, S.; AGUILAR, I.; LAWLOR, T. J.; WELLER, J. I. |
Afiliación : |
DANIELA A.L. LOURENCO, University of Georgia, Athens, GA, USA; IGNACY MISZTAL, University of Georgia, Athens, GA, USA; SHOGO TSURUTA, University of Georgia, Athens, GA, USA; IGNACIO AGUILAR GARCIA, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; THOMAS J. LAWLOR, Holstein Association USA Inc., Brattleboro, VT, USA; JOEL I. WELLER, Agricultural Research Organization, the Volcani Center, Bet Dagan, Israe. |
Título : |
Are evaluations on young genotyped dairy bulls benefiting from the past generations? [conference paper]. |
Complemento del título : |
Volume Species Breeding: Dairy cattle, 297. |
Fecha de publicación : |
2014 |
Fuente / Imprenta : |
In: Proceedings of the World Congress on Genetics Applied to Livestock Production, 10., Vancouver, BC, Canada, August 17-22, 2014. p.297. |
Idioma : |
Inglés |
Contenido : |
ABSTRACT.
Datasets of US and Israeli Holsteins were used to evaluate the impact of older generations on ability to predict EBV of young genotyped animals in traditional and single-step genomic BLUP. Inclusion of two (A2) or all (Af) ancestor generations was also evaluated. A total of 34,506 US and 1,305 Israeli bulls were genotyped. Thresholds for data deletion were based on 5 years interval. The number of generations deleted without reduction in accuracy depended on data structure and trait. For US Holsteins, removing 3 and 4 generations of data did not reduce accuracy for final score in Af and A2, respectively. For Israeli Holsteins, the effect of removing older generations depended on the genetic origins of the bulls. Therefore, truncating older data does not decrease the accuracy of young genotyped bulls, while reducing computation requirements and helping to find problems in the population structure. |
Palabras claves : |
Genomic selection; Pedigree depth; SsGBLUP. |
Asunto categoría : |
L10 Genética y mejoramiento animal |
URL : |
http://www.ainfo.inia.uy/digital/bitstream/item/15451/1/Lourenco-et-al.-2014.-WCGALP.pdf
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Marc : |
LEADER 01622nam a2200205 a 4500 001 1061927 005 2021-03-31 008 2014 bl uuuu u01u1 u #d 100 1 $aLOURENCO, D 245 $aAre evaluations on young genotyped dairy bulls benefiting from the past generations? [conference paper].$h[electronic resource] 260 $aIn: Proceedings of the World Congress on Genetics Applied to Livestock Production, 10., Vancouver, BC, Canada, August 17-22, 2014. p.297.$c2014 520 $aABSTRACT. Datasets of US and Israeli Holsteins were used to evaluate the impact of older generations on ability to predict EBV of young genotyped animals in traditional and single-step genomic BLUP. Inclusion of two (A2) or all (Af) ancestor generations was also evaluated. A total of 34,506 US and 1,305 Israeli bulls were genotyped. Thresholds for data deletion were based on 5 years interval. The number of generations deleted without reduction in accuracy depended on data structure and trait. For US Holsteins, removing 3 and 4 generations of data did not reduce accuracy for final score in Af and A2, respectively. For Israeli Holsteins, the effect of removing older generations depended on the genetic origins of the bulls. Therefore, truncating older data does not decrease the accuracy of young genotyped bulls, while reducing computation requirements and helping to find problems in the population structure. 653 $aGenomic selection 653 $aPedigree depth 653 $aSsGBLUP 700 1 $aMISZTAL, I. 700 1 $aTSURUTA, S. 700 1 $aAGUILAR, I. 700 1 $aLAWLOR, T. J. 700 1 $aWELLER, J. I.
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