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Registro completo
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Biblioteca (s) : |
INIA La Estanzuela. |
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Fecha : |
18/03/2022 |
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Actualizado : |
02/09/2022 |
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Tipo de producción científica : |
Artículos en Revistas Indexadas Internacionales |
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Autor : |
SILVA, P.; EVERS, B.; KIEFFABER, A.; WANG, X.; BROWN, R.; GAO, L.; FRITZ, A.; CRAIN, J.; POLAND, J. |
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Afiliación : |
MARIA PAULA SILVA VILLELLA, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay./ Department of Plant Pathology, College of Agriculture, Kansas State University, Manhattan, USA.; BYRON EVERS, Department of Plant Pathology, College of Agriculture, Kansas State University, Manhattan, Kansas, USA.; ALEXANDRIA KIEFFABER, Department of Plant Pathology, College of Agriculture, Kansas State University, Manhattan, Kansas, USA.; XU WANG, Department of Agricultural and Biological Engineering, University of Florida, IFAS Gulf Coast , Research and Education Center, Wimauma, Florida,USA.; RICHARD BROWN, Department of Plant Pathology, College of Agriculture, Kansas State University, Manhattan, USA.; LIANGLIANG GAO, Department of Plant Pathology, College of Agriculture, Kansas State University, Manhattan, USA.; ALLAN FRITZ, Department of Agronomy, College of Agriculture, Kansas State University, Manhattan, Kansas, 66506, USA.; JARED CRAIN, Department of Plant Pathology, College of Agriculture, Kansas State University, Manhattan, Kansas, 66506, USA.; JESSE POLAND, Department of Plant Pathology, College of Agriculture, Kansas State University, Manhattan, Kansas, 66506, USA. |
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Título : |
Applied phenomics and genomics for improving barley yellow dwarf resistance in winter wheat. |
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Fecha de publicación : |
2022 |
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Fuente / Imprenta : |
G3 Genes| Genomes| Genetics, (Bethesda, Md.), 2022;, jkac064, Open Access. DOI:https://doi.org/10.1093/g3journal/jkac064 |
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DOI : |
10.1093/g3journal/jkac064 |
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Idioma : |
Inglés |
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Notas : |
Article history: Received: 22 December 2021/Accepted: 12 March 2022/Published: 30 March 2022.
The Author(s) (2022) . Published by Oxford University Press on behalf of the Genetics Society of America. This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited. |
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Contenido : |
Abstract:
Barley yellow dwarf (BYD) is one of the major viral diseases of cereals. Phenotyping BYD in wheat is extremely challenging due to similarities to other biotic and abiotic stresses. Breeding for resistance is additionally challenging as the wheat primary germplasm pool lacks genetic resistance, with most of the few resistance genes named to date originating from a wild relative species. The objectives of this study were to, i) evaluate the use of high-throughput phenotyping (HTP) from unmanned aerial systems to improve BYD assessment and selection, ii) identify genomic regions associated with BYD resistance, and iii) evaluate genomic prediction models ability to predict BYD resistance. Up to 107 wheat lines were phenotyped during each of five field seasons under both insecticide treated and untreated plots. Across all seasons, BYD severity was lower with the insecticide treatment and plant height (PTHTM) and grain yield (GY) showed increased values relative to untreated entries. Only 9.2% of the lines were positive for the presence of the translocated segment carrying resistance gene Bdv2 on chromosome 7DL. Despite the low frequency, this region was identified through association mapping. Furthermore, we mapped a potentially novel genomic region for resistance on chromosome 5AS. Given the variable heritability of the trait (0.211 ? 0.806), we obtained relatively good predictive ability for BYD severity ranging between 0.06 ? 0.26. Including Bdv2 on the predictive model had a large effect for predicting BYD but almost no effect for PTHTM and GY. This study was the first attempt to characterize BYD using field-HTP and apply GS to predict the disease severity. These methods have the potential to improve BYD characterization and identifying new sources of resistance will be crucial for delivering BYD resistant germplasm. MenosAbstract:
Barley yellow dwarf (BYD) is one of the major viral diseases of cereals. Phenotyping BYD in wheat is extremely challenging due to similarities to other biotic and abiotic stresses. Breeding for resistance is additionally challenging as the wheat primary germplasm pool lacks genetic resistance, with most of the few resistance genes named to date originating from a wild relative species. The objectives of this study were to, i) evaluate the use of high-throughput phenotyping (HTP) from unmanned aerial systems to improve BYD assessment and selection, ii) identify genomic regions associated with BYD resistance, and iii) evaluate genomic prediction models ability to predict BYD resistance. Up to 107 wheat lines were phenotyped during each of five field seasons under both insecticide treated and untreated plots. Across all seasons, BYD severity was lower with the insecticide treatment and plant height (PTHTM) and grain yield (GY) showed increased values relative to untreated entries. Only 9.2% of the lines were positive for the presence of the translocated segment carrying resistance gene Bdv2 on chromosome 7DL. Despite the low frequency, this region was identified through association mapping. Furthermore, we mapped a potentially novel genomic region for resistance on chromosome 5AS. Given the variable heritability of the trait (0.211 ? 0.806), we obtained relatively good predictive ability for BYD severity ranging between 0.06 ? 0.26. Including Bdv2 on the predictive mo... Presentar Todo |
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Palabras claves : |
Barley yellow dwarf (BYD); Genomic Selection (GS); High-throughput Phenotyping (HTP); Resistance; Tolerance; Triticum aestivum; Virus. |
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Asunto categoría : |
-- |
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URL : |
http://www.ainfo.inia.uy/digital/bitstream/item/16662/1/Applied-phenomics-and-genomics-for-improving-barley-yellow-dwarf-resistance-in-winter.-2022.Silva.pdf
https://academic.oup.com/g3journal/article-pdf/12/7/jkac064/44473353/jkac064.pdf
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Marc : |
LEADER 03303naa a2200325 a 4500
001 1062870
005 2022-09-02
008 2022 bl uuuu u00u1 u #d
024 7 $a10.1093/g3journal/jkac064$2DOI
100 1 $aSILVA, P.
245 $aApplied phenomics and genomics for improving barley yellow dwarf resistance in winter wheat.$h[electronic resource]
260 $c2022
500 $aArticle history: Received: 22 December 2021/Accepted: 12 March 2022/Published: 30 March 2022. The Author(s) (2022) . Published by Oxford University Press on behalf of the Genetics Society of America. This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
520 $aAbstract: Barley yellow dwarf (BYD) is one of the major viral diseases of cereals. Phenotyping BYD in wheat is extremely challenging due to similarities to other biotic and abiotic stresses. Breeding for resistance is additionally challenging as the wheat primary germplasm pool lacks genetic resistance, with most of the few resistance genes named to date originating from a wild relative species. The objectives of this study were to, i) evaluate the use of high-throughput phenotyping (HTP) from unmanned aerial systems to improve BYD assessment and selection, ii) identify genomic regions associated with BYD resistance, and iii) evaluate genomic prediction models ability to predict BYD resistance. Up to 107 wheat lines were phenotyped during each of five field seasons under both insecticide treated and untreated plots. Across all seasons, BYD severity was lower with the insecticide treatment and plant height (PTHTM) and grain yield (GY) showed increased values relative to untreated entries. Only 9.2% of the lines were positive for the presence of the translocated segment carrying resistance gene Bdv2 on chromosome 7DL. Despite the low frequency, this region was identified through association mapping. Furthermore, we mapped a potentially novel genomic region for resistance on chromosome 5AS. Given the variable heritability of the trait (0.211 ? 0.806), we obtained relatively good predictive ability for BYD severity ranging between 0.06 ? 0.26. Including Bdv2 on the predictive model had a large effect for predicting BYD but almost no effect for PTHTM and GY. This study was the first attempt to characterize BYD using field-HTP and apply GS to predict the disease severity. These methods have the potential to improve BYD characterization and identifying new sources of resistance will be crucial for delivering BYD resistant germplasm.
653 $aBarley yellow dwarf (BYD)
653 $aGenomic Selection (GS)
653 $aHigh-throughput Phenotyping (HTP)
653 $aResistance
653 $aTolerance
653 $aTriticum aestivum
653 $aVirus
700 1 $aEVERS, B.
700 1 $aKIEFFABER, A.
700 1 $aWANG, X.
700 1 $aBROWN, R.
700 1 $aGAO, L.
700 1 $aFRITZ, A.
700 1 $aCRAIN, J.
700 1 $aPOLAND, J.
773 $tG3 Genes| Genomes| Genetics, (Bethesda, Md.), 2022;, jkac064, Open Access. DOI:https://doi.org/10.1093/g3journal/jkac064
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INIA La Estanzuela (LE) |
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| Registros recuperados : 7 | |
| 1. |  | BESIL, N.; PÉREZ-PARADA, A.; BOLOGNA, F.; CESIO, M.V.; RIVAS, F.; HEINZEN, H. Dissipation of selected insecticides and fungicides applied during pre-harvest on mandarin and orange trees in Uruguay. Scientia Horticulturae, 5 April 2019, Volume 248, Pages 34-40. Article history: Received 4 October 2018 / Revised 28 December 2018 / Accepted 29 December 2018 / Available online 9 January 2019.
Funding sources: Financial support from Instituto Nacional de Investigación Agropecuaria Uruguay,...| Tipo: Artículos en Revistas Indexadas Internacionales | Circulación / Nivel : Internacional - -- |
| Biblioteca(s): INIA Las Brujas. |
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| 2. | | BESIL, N.; PÉREZ-PARADA, A.; CESIO, V.; VARELA, P.; RIVAS, F.; HEINZEN, H. Degradation of imazalil, orthophenylphenol and pyrimethanil in Clementine mandarins under conventional postharvest industrial conditions at 4 °C. Food Chemistry, 2016, v.194, p. 1132-1137. Article history: Received 16 April 2015 / Received in revised form 25 August 2015 / Accepted 25 August 2015 / Available online 29 August 2015.
Chemical compounds studied in this article: Imazalil (PubChem CID: 37175) / Orthophenylphenol...| Tipo: Artículos en Revistas Indexadas Internacionales | Circulación / Nivel : Internacional - -- |
| Biblioteca(s): INIA Las Brujas. |
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| 3. | | PALLADINO, C.; PÉREZ, C.A.; PAREJA, L.; PÉREZ-PARADA. A.; FRANCO, J.; PEREYRA, S. Fungicide strategies for Ramularia Leaf Spot control recommended in Uruguay and its residues in barley grains. [Estrategias de fungicidas recomendadas para el control de ramulariosis en Uruguay y sus residuos en granos de cebada.]. [Estratégias de fungicidas para o controlo da ramulariose recomendadas no Uruguai e respectivos resíduos nos grãos de cevada.]. Section. Plant protection. Agrociencia Uruguay, 2024, Vol.28, e1262. https://doi.org/10.31285/AGRO.28.1262 -- OPEN ACCESS. Article history: Received 04 October 2023; Accepted 01 December 2023; Published 01 February 2024. -- Editor: María Inés Siri, Universidad de la República, Montevideo, Uruguay. -- Correspondence: Cintia Palladino, cpalladino@cup.edu.uy --...| Tipo: Artículos en Revistas Indexadas Nacionales | Circulación / Nivel : Nacional - -- |
| Biblioteca(s): INIA Las Brujas. |
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| 4. | | PALLADINO, C.; MUELA, A.; TABORDA, B.; PUIGVERT, F.; PÉREZ-PARADA, A.; COLAZZO, M.; PÉREZ, C. A.; PEREYRA, S.; PAREJA, L. Application of a straightforward Mmthodology by LC-QqQ-MS/MS and GC-MS to ensure food safety of barley and wheat grain. ACS Agricultural Science and Technology, 2022, Volume 2, Issue 2, Pages 371-380. doi: https://doi.org/10.1021/acsagscitech.1c00263 Article history: Received 29 November 2021; Accepted 24 February 2022; Revised 4 February 2022; Published online 16 March 2022; Published in issue 18 April 2022.
Corresponding author: Pareja, L.; Departamento de Química Del Litoral,...| Tipo: Artículos en Revistas Indexadas Internacionales | Circulación / Nivel : Internacional - -- |
| Biblioteca(s): INIA Las Brujas. |
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| 5. | | PAREJA, L.; COLAZZO, M.; PÉREZ-PARADA, A.; NIELL, S.; CARRASCO-LETELIER, L.; BESIL, N.; CESIO, M.V.; HEINZEN, H. Detection of pesticides in active and depopulated beehives in Uruguay International Journal of Environmental Research and Public Health, 2011, v. 8, n. 10, p. 3844-3858 OPEN ACCESS ARTICLE.| Tipo: Artículos en Revistas Indexadas Internacionales | Circulación / Nivel : B - 1 |
| Biblioteca(s): INIA La Estanzuela; INIA Las Brujas. |
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| 6. | | TERRA, J.A.; FERNÁNDEZ, A.; CANTOU, G.; MARTÍNEZ, S.; CASTILLO, J.; MACEDO, I.; FERRANDO, L.; IRISARRI, P.; CARRASCO-LETELIER, L.; PÉREZ-PARADA, A.; ROEL, A. Integrated rice-pasture systems sustainability in Uruguay.* Panel: Plant component. In: IV International Symposium on Integrated Crop-livestock Systems; Bento Gonçalves (RS), Brazil, November 7-11, 2023. Conference Proceedings, Volume 1. pp.61-65. * Part of Project: Evaluation of the environmental sustainability of rice production systems, funded by ANII. -- Junto al IV ICLS se realizó el III Congresso Brasileiro de Sistemas Integrados de Produção Agropecuária y el VII Encontro de...| Tipo: Trabajos en Congresos/Conferencias |
| Biblioteca(s): INIA Las Brujas. |
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| 7. | | ROEL, A.; MACEDO, I.; CASTILLO, J.; MARTÍNEZ, S.; CARRASCO-LETELIER, L.; AYALA, W.; TERRA, J.A.; FERNÁNDEZ, A.; FERRANDO, L.; IRISARRI, P.; PÉREZ-PARADA, A.; CANTOU, G. Sostenibilidad ambiental de los sistemas de producción arroceros. Arroz-Ganadería. Revista INIA Uruguay, Setiembre 2023, no.74 p.48-52. (Revista INIA; 74).| Tipo: Artículos en Revistas Agropecuarias |
| Biblioteca(s): INIA Las Brujas. |
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| Registros recuperados : 7 | |
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