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Registro completo
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Biblioteca (s) : |
INIA Las Brujas. |
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Fecha : |
23/11/2021 |
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Actualizado : |
23/11/2021 |
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Tipo de producción científica : |
Artículos en Revistas Indexadas Internacionales |
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Autor : |
OBERTI, H.; SPANGENBERG, G.; COGAN, C.; REYNO, R.; FEIJOO, M.; MURCHIO, S.; DALLA RIZZA, M. |
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Afiliación : |
HÉCTOR OBERTI RVAROLA, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; GERMAN SPANGENBERG, Agriculture Victoria, AgriBio, Centre for AgriBioscience, Bundoora, VIC, Australia; School of Applied Systems Biology, La Trobe University, Bundoora, VIC, Australia.; C. COGAN, Agriculture Victoria, AgriBio, Centre for AgriBioscience, Bundoora, VIC, Australia; School of Applied Systems Biology, La Trobe University, Bundoora, VIC, Australia.; RAFAEL ALEJANDRO REYNO PODESTA, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; M. FEIJOO, Centro Universitario Regional del Este (CURE), Polo de Desarrollo Universitario: Patogenicidad, toxicidad y genética en los ecosistemas pastoriles de la región Este de Uruguay, Treinta y Tres, Uruguay.; MARIA SARA MURCHIO VIGNOLO, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; MARCO DALLA RIZZA VILARO, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay. |
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Título : |
Genome-wide analysis of Claviceps paspali: insights into the secretome of the main species causing ergot disease in Paspalum spp. |
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Complemento del título : |
Research article. |
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Fecha de publicación : |
2021 |
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Fuente / Imprenta : |
BMC Genomics, December 2021, Volume 22, Issue 1, Article number 766. Gold Open Access, Green Open Access. doi: https://doi.org/10.1186/s12864-021-08077-0 |
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ISSN : |
1471-2164 |
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DOI : |
10.1186/s12864-021-08077-0 |
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Idioma : |
Inglés |
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Notas : |
Article history: Received 24 September 2020; Accepted 11 October 2021; Published 26 October 2021.
Funding: This project was supported by the National Institute of Agricultural Research of Uruguay (INIA) project BT-19, and by project ATN/KF-13883-UR from the Inter-American Development Bank. HO Scholarship was founded by through the INIA Postgraduate Scholarship Program. The funding bodies played no role in the design of the study and collection, analysis, and interpretation of data and in writing the manuscript.
Acknowledgments: We thank Eduardo Abreo for C. paspali ILB388 isolate and for reading the manuscript, and Fernando Lattanzi for reading the manuscript.
Corresponding author: Dalla-Rizza, M.; Instituto Nacional de Investigación Agropecuaria (INIA). Unidad de Biotecnología. Estación Experimental INIA Las Brujas, Ruta 48 km, Canelones, Uruguay; email:mdallarizza@inia.org.uy |
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Contenido : |
ABSTRACT - Background: The phytopatogen Claviceps paspali is the causal agent of Ergot disease in Paspalum spp., which includes highly productive forage grasses such as P. dilatatum. This disease impacts dairy and beef production by affecting seed quality and producing mycotoxins that can affect performance in feeding animals. The molecular basis of pathogenicity of C. paspali remains unknown, which makes it more difficult to find solutions for this problem. Secreted proteins are related to fungi virulence and can manipulate plant immunity acting on different subcellular localizations. Therefore, identifying and characterizing secreted proteins in phytopathogenic fungi will provide a better understanding of how they overcome host defense and cause disease. The aim of this work is to analyze the whole genome sequences of three C. paspali isolates to obtain a comparative genome characterization based on possible secreted proteins and pathogenicity factors present in their genome. In planta RNA-seq analysis at an early stage of the interaction of C. paspali with P. dilatatum stigmas was also conducted in order to determine possible secreted proteins expressed in the infection process.
© Copyright 2021 Elsevier B.V., All rights reserved. |
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Palabras claves : |
Biotroph; Comparative genomics; Effectors; In silico prediction; Pathogenicity factors. |
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Asunto categoría : |
F01 Cultivo |
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URL : |
https://bmcgenomics.biomedcentral.com/track/pdf/10.1186/s12864-021-08077-0.pdf
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Marc : |
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001 1062542
005 2021-11-23
008 2021 bl uuuu u00u1 u #d
022 $a1471-2164
024 7 $a10.1186/s12864-021-08077-0$2DOI
100 1 $aOBERTI, H.
245 $aGenome-wide analysis of Claviceps paspali$binsights into the secretome of the main species causing ergot disease in Paspalum spp.$h[electronic resource]
260 $c2021
500 $aArticle history: Received 24 September 2020; Accepted 11 October 2021; Published 26 October 2021. Funding: This project was supported by the National Institute of Agricultural Research of Uruguay (INIA) project BT-19, and by project ATN/KF-13883-UR from the Inter-American Development Bank. HO Scholarship was founded by through the INIA Postgraduate Scholarship Program. The funding bodies played no role in the design of the study and collection, analysis, and interpretation of data and in writing the manuscript. Acknowledgments: We thank Eduardo Abreo for C. paspali ILB388 isolate and for reading the manuscript, and Fernando Lattanzi for reading the manuscript. Corresponding author: Dalla-Rizza, M.; Instituto Nacional de Investigación Agropecuaria (INIA). Unidad de Biotecnología. Estación Experimental INIA Las Brujas, Ruta 48 km, Canelones, Uruguay; email:mdallarizza@inia.org.uy
520 $aABSTRACT - Background: The phytopatogen Claviceps paspali is the causal agent of Ergot disease in Paspalum spp., which includes highly productive forage grasses such as P. dilatatum. This disease impacts dairy and beef production by affecting seed quality and producing mycotoxins that can affect performance in feeding animals. The molecular basis of pathogenicity of C. paspali remains unknown, which makes it more difficult to find solutions for this problem. Secreted proteins are related to fungi virulence and can manipulate plant immunity acting on different subcellular localizations. Therefore, identifying and characterizing secreted proteins in phytopathogenic fungi will provide a better understanding of how they overcome host defense and cause disease. The aim of this work is to analyze the whole genome sequences of three C. paspali isolates to obtain a comparative genome characterization based on possible secreted proteins and pathogenicity factors present in their genome. In planta RNA-seq analysis at an early stage of the interaction of C. paspali with P. dilatatum stigmas was also conducted in order to determine possible secreted proteins expressed in the infection process. © Copyright 2021 Elsevier B.V., All rights reserved.
653 $aBiotroph
653 $aComparative genomics
653 $aEffectors
653 $aIn silico prediction
653 $aPathogenicity factors
700 1 $aSPANGENBERG, G.
700 1 $aCOGAN, C.
700 1 $aREYNO, R.
700 1 $aFEIJOO, M.
700 1 $aMURCHIO, S.
700 1 $aDALLA RIZZA, M.
773 $tBMC Genomics, December 2021, Volume 22, Issue 1, Article number 766. Gold Open Access, Green Open Access. doi: https://doi.org/10.1186/s12864-021-08077-0
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| 164. |  | CASTRO, M.; PEREYRA, S.; VERA, M.; GONZALEZ, N.; CARDOZO, V. Gramíneas: cultivares evaluados en la Estanzuela, Uruguay, durante 2015. 3. Cereales para producción de forraje: culttivares de Avena (Avena byzantina L., Avena sativa L. y Avena Strigosa Schreb.) Cebada forrajera (Hordeum vulgare L.) y Triticale (Triticosecale spp.). In:RESULTADOS EXPERIMENTALES DE LA EVALUACIÓN NACIONAL DE CULTIVARES DE ESPECIES FORRAJERAS: ANUALES, BIANUALES Y PERENNES. Período 2015. La Estanzuela (UY): INASE ; INIA, 2015. p.12-15.| Biblioteca(s): INIA La Estanzuela. |
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| 165. | | CONDE, P.; VILLAMIL, J.J.; BRUZZONE, J.; LEONI, C.; ZOPPOLO, R.; VILLAMIL, J. (Ed.). Catálogo de cultivares de olivos 2019. Evaluados en INIA-Uruguay. Montevideo (UY): INIA, 2019. 73 p. (INIA Boletín de Divulgación; 117). Colaboradores: 1.-Programa Nacional de Investigación en Producción Frutícola, INIA, Uruguay: David Bianchi - Cecilia Martínez - Richard Ashfield - Jonathan Dávila - Rafael Grasso - Claudio García - Leandro Martinelli - Danilo Cabrera -...| Tipo: Boletín de Divulgación |
| Biblioteca(s): INIA La Estanzuela; INIA Las Brujas; INIA Tacuarembó; INIA Treinta y Tres. |
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| 166. | | CUITIÑO, M.J.; MANASLISKI, S.; MORALES, M.; CARDOZO, V. 2. Resultados. In:Resultados experimentales de la evaluación nacional de cultivares de maíz grano con medidas de bioseguridad: período 2017.La Estanzuela , Uruguay: INIA; INASE, 2018. p. 11-17. Editado por el Equipo de Evaluación de Cultivares Impreso por Unidad de Comunicación y Transferencia de Tecnología INIA La Estanzuela. Convenio INASE-INIA.| Biblioteca(s): INIA La Estanzuela. |
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| 167. | | CASTRO, M.; PEREYRA, S.; MORALES, M.; CARDOZO, V. 5. Raigrás anual (Lolium multiflorum Lam.). In: Resultados Experimentales de la Evaluación Nacional de Cultivares de Especies Forrajeras: anuales, bianuales y perennes: período 2017. La Estanzuela (UY): INIA; INASE, 2017. p. 21-26. Editado por el Equipo de Evaluación de Cultivares. Impreso por Unidad de Comunicación y Transferencia de Tecnología INIA La Estanzuela. Convenio INASE-INIA.| Biblioteca(s): INIA La Estanzuela. |
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| 168. | | BRACKMANN, A.; PAVANELLO, E. P.; BOTH, V.; JANISCH, D.; SCHMITT, O.; GIMÉNEZ, G. Avaliação de genótipos de morangueiro quanto à qualidade e potencial de armazenamento. [Evaluation of strawberry genotypes on the quality and storage potential]. Revista Ceres, 2011, Volume 58, issue 5, pp. 542-547. https://doi.org/10.1590/S0034-737X2011000500002 -- OPEN ACCESS. Article history: Recebido 24 Jun 2010; Aceito 29 Set 2011; Data do Fascículo Out 2011; Publicação nesta coleção 22 Nov 2011. -- License: This work is licensed under a Creative Commons Attribution 4.0 International License....| Tipo: Artículos en Revistas Indexadas Internacionales | Circulación / Nivel : B - 3 |
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| 172. | | AYALA, W.; SERRON, N.; PEREYRA, F.; HERKEN, G.; OLANO, I.; RUETE, R.; ALMEIDA, M.; TARÁN, S. Festuca en sistemas ganaderos. Producción y persistencia. In: Día de Campo Unidad Experimental Palo a Pique, Oct. 2018. Treinta y Tres (Uruguay): INIA, 2018, p.3-6.| Biblioteca(s): INIA Treinta y Tres. |
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| 179. | | BLANCO, P.H.; MOLINA, F.; MARTÍNEZ, S.; CARRACELAS, G.; VARGAS, J.; VILLALBA, M.; ESCALANTE, F. Evaluación de cultivares de calidad americana - E5 Y E4. ln: JORNADA ANUAL ARROZ, 2016, INIA TREINTA Y TRES, TREINTA Y TRES, UY. Arroz: resultados experimentales 2015-2016. Treinta y Tres, (Uruguay): INIA, 2016. cap. 3, p. 22-24. (INIA Serie Actividades de Difusión; 765)| Biblioteca(s): INIA Tacuarembó; INIA Treinta y Tres. |
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