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Registro completo
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Biblioteca (s) : |
INIA Las Brujas. |
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Fecha : |
30/05/2019 |
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Actualizado : |
20/04/2020 |
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Tipo de producción científica : |
Artículos en Revistas Indexadas Internacionales |
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Autor : |
ABREO, E.; ALTIER, N. |
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Afiliación : |
EDUARDO RAUL ABREO GIMENEZ, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; NORA ADRIANA ALTIER MANZINI, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay. |
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Título : |
Pangenome of Serratia marcescens strains from nosocomial and environmental origins reveals different populations and the links between them. |
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Fecha de publicación : |
2019 |
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Fuente / Imprenta : |
Scientific Reports, 1 December 2019, Volume 9, Issue 1, Article number 46. OPEN ACCESS. Doi: https://doi.org/10.1038/s41598-018-37118-0 |
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ISSN : |
2045-2322 |
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DOI : |
10.1038/s41598-018-37118-0 |
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Idioma : |
Inglés |
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Notas : |
Article history: Received: 25 July 2018 // Accepted: 30 November 2018 // Published online: 10 January 2019.
Author Contributions: Eduardo Abreo and Nora Altier designed the study, E.A. performed the genomic analysis and wrote the manuscript, E.A. and N.A. analyzed the results. Both authors reviewed the manuscript. |
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Contenido : |
ABSTRACT.
Serratia marcescens is a Gram-negative bacterial species that can be found in a wide range of environments like soil, water and plant surfaces, while it is also known as an opportunistic human pathogen in hospitals and as a plant growth promoting bacteria (PGPR) in crops. We have used a pangenome-based approach, based on publicly available genomes, to apply whole genome multilocus sequence type schemes to assess whether there is an association between source and genotype, aiming at differentiating between isolates from nosocomial sources and the environment, and between strains reported as PGPR from other environmental strains. Most genomes from a nosocomial setting and environmental origin could be assigned to the proposed nosocomial or environmental MLSTs, which is indicative of an association between source and genotype. The fact that a few genomes from a nosocomial source showed an environmental MLST suggests that a minority of nosocomial strains have recently derived from the environment. PGPR strains were assigned to different environmental types and clades but only one clade comprised strains accumulating a low number of known virulence and antibiotic resistance determinants and was exclusively from environmental sources. This clade is envisaged as a group of promissory MLSTs for selecting prospective PGPR strains.
© 2019, The Author(s). |
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Palabras claves : |
ANTIBIOTIC RESISTANCE; CLADISTICS; GENOME; GENOTYPE; SERRATIA MARCESCENS; VIRULENCE. |
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Asunto categoría : |
H20 Enfermedades de las plantas |
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URL : |
http://www.ainfo.inia.uy/digital/bitstream/item/12716/1/Abreo-Altier.-2019.-Scientific-Reports.-10.1038-s41598-018-37118-0.pdf
https://www.nature.com/articles/s41598-018-37118-0.pdf
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Marc : |
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100 1 $aABREO, E.
245 $aPangenome of Serratia marcescens strains from nosocomial and environmental origins reveals different populations and the links between them.$h[electronic resource]
260 $c2019
500 $aArticle history: Received: 25 July 2018 // Accepted: 30 November 2018 // Published online: 10 January 2019. Author Contributions: Eduardo Abreo and Nora Altier designed the study, E.A. performed the genomic analysis and wrote the manuscript, E.A. and N.A. analyzed the results. Both authors reviewed the manuscript.
520 $aABSTRACT. Serratia marcescens is a Gram-negative bacterial species that can be found in a wide range of environments like soil, water and plant surfaces, while it is also known as an opportunistic human pathogen in hospitals and as a plant growth promoting bacteria (PGPR) in crops. We have used a pangenome-based approach, based on publicly available genomes, to apply whole genome multilocus sequence type schemes to assess whether there is an association between source and genotype, aiming at differentiating between isolates from nosocomial sources and the environment, and between strains reported as PGPR from other environmental strains. Most genomes from a nosocomial setting and environmental origin could be assigned to the proposed nosocomial or environmental MLSTs, which is indicative of an association between source and genotype. The fact that a few genomes from a nosocomial source showed an environmental MLST suggests that a minority of nosocomial strains have recently derived from the environment. PGPR strains were assigned to different environmental types and clades but only one clade comprised strains accumulating a low number of known virulence and antibiotic resistance determinants and was exclusively from environmental sources. This clade is envisaged as a group of promissory MLSTs for selecting prospective PGPR strains. © 2019, The Author(s).
653 $aANTIBIOTIC RESISTANCE
653 $aCLADISTICS
653 $aGENOME
653 $aGENOTYPE
653 $aSERRATIA MARCESCENS
653 $aVIRULENCE
700 1 $aALTIER, N.
773 $tScientific Reports, 1 December 2019, Volume 9, Issue 1, Article number 46. OPEN ACCESS. Doi: https://doi.org/10.1038/s41598-018-37118-0
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INIA Las Brujas (LB) |
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| 33. |  | GARAYCOCHEA, S.; ALTIER, N. Estudio de la diversidad genética de las comunidades microbianas asociadas a la dinámica del P en suelos de Uruguay. GGM 47 - COMUNICACIONES LIBRES - GGM. GENÓMICA Y GENÉTICA MOLECULAR In: JOURNAL OF BASIC & APPLIED GENETICS, 2016, Vol.27, Iss. 1 (Supp.). XVI LATIN AMERICAN CONGRESS OF GENETICS, IV CONGRESS OF THE URUGUAYAN SOCIETY OF GENETICS, XLIX ANNUAL MEETING OF THE GENETICS SOCIETY OF CHILE, XLV ARGENTINE CONGRESS OF GENETICS, 9-12 October 2016. PROCEEDINGS. Montevideo (Uruguay): SAG, 2016. p. 278| Tipo: Trabajos en Congresos/Conferencias |
| Biblioteca(s): INIA Las Brujas. |
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| 38. | | REBUFFO, M.; ALTIER, N. Mejoramiento genetico de trébol rojo In: RISSO, D.; BERRETTA, E.J.; MORON, A. (Eds.). Producción y manejo de pasturas. Seminario técnico, 17-19 octubre 1995, INIA Tacuarembó. Montevideo (Uruguay): INIA, 1996. p151-153 (INIA Serie Técnica; 80)| Tipo: Capítulo en Libro Técnico-Científico |
| Biblioteca(s): INIA La Estanzuela; INIA Las Brujas; INIA Tacuarembó. |
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| 40. | | ALTIER, N.; ABREO, E. One health: considerations in the International Year of Plant Health. [Una sola salud: consideraciones en el Año Internacional de la Salud Vegetal]. Special Issue X Encuentro Latinoamericano y del Caribe de Biotecnología Agropecuaria; XII Simposio REDBIO Argentina. Roca, William, Ed. 12 al 15 de noviembre de 2019, Montevideo, Uruguay. Agrociencia Uruguay 2020, v. 24, no. NE2, Article 422. DOI: 10.31285/AGRO.24.413 17 p Article history: Received 29 Jun. 2020 // Accepted 28 Sep. 2020 // Published 17 Dec 2020.
Comité científico editor:
Dra. Marisa López-Bilbao (INTA, Hurlingham, Provincia de Buenos Aires, Argentina); Dra. Sandra Sharry (Universidad...| Tipo: Artículos en Revistas Indexadas Internacionales | Circulación / Nivel : -- - -- |
| Biblioteca(s): INIA Treinta y Tres. |
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| Registros recuperados : 218 | |
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