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Registro completo
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Biblioteca (s) : |
INIA La Estanzuela. |
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Fecha : |
19/11/2021 |
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Actualizado : |
02/09/2022 |
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Tipo de producción científica : |
Artículos en Revistas Indexadas Internacionales |
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Autor : |
GAURAV, K.; ARORA, S.; SILVA, P.; SÁNCHEZ-MARTÍN, J.; HORSNELL,R.; GAO, L.; BRAR ,G.S.; WIDRIG,V.; JOHN RAUPP,W.; SINGH, N.; WU, S.; KALE, S.M.; CHINOY, C.; NICHOLSON, P.; QUIROZ-CHÁVEZ, J.; SIMMONDS, J.; HAYTA, S.; SMEDLEY, M. A; HARWOOD, W.; PEARCE, S.; GILBERT, D.; KANGARA, N.; GARDENER, C.; FORNER-MARTÍNEZ, M.; LIU, J.; YU, G.; BODEN, S.A.; PASCUCCI, A.; GHOSH, S.; HAFEEZ, A.N.; O'HARA, T.; WAITES, J.; CHEEMA, J.; STEUERNAGEL, B.; PATPOUR, M.; JUSTESEN, A.F.; LIU, S.; RUDD, J. C.; AVNI, R.; SHARON, A.R; STEINER, B.; KIRANA, R.P.; BUERSTMAYR, H.; MEHRABI, A.A.; NASYROVA, F.Y.; CHAYUT, N.; MATNY, O.; STEFFENSON, B. J.; SANDHU, N.; CHHUNEJA, P.; LAGUDAH, E.; ELKOT, A.F.; TYRRELL, S.; BIAN, X.; DAVEY, R.P.; SIMONSEN, M.; SCHAUSER, L.; TIWARI, V.K.; RANDY KUTCHER, H.; HUCL, P.; LI, A.; LIU, D.C.; MAO, L.; XU, S.; BROWN-GUEDIRA, G.; FARIS, J.; DVORAK, J.; LUO, M.CH.; KRASILEVA, K.; LUX, T.; ARTMEIER, S.; MAYER, K. F. X.; UAUY, C.; MASCHER, M.; BENTLEY, A.R.; KELLER, B.; POLAND, J.; WULFF, B. B. H. |
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Afiliación : |
KUMAR GAURAV; SANU ARORA; MARIA PAULA SILVA VILLELLA, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay. |
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Título : |
Population genomic analysis of Aegilops tauschii identifies targets for bread wheat improvement. |
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Fecha de publicación : |
2022 |
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Fuente / Imprenta : |
Nature Biotechnology, Volume 40, Pages 422-431, March 2022. Open Access. doi: https://doi.org/10.1038/s41587-021-01058-4 |
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DOI : |
10.1038/s41587-021-01058-4 |
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Idioma : |
Inglés |
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Contenido : |
Abstract:
Aegilops tauschii, the diploid wild progenitor of the D subgenome of bread wheat, is a reservoir of genetic diversity for improving bread wheat performance and environmental resilience. Here we sequenced 242 Ae. tauschii accessions and compared them to the wheat D subgenome to characterize genomic diversity. We found that a rare lineage of Ae. tauschii geographically restricted to present-day Georgia contributed to the wheat D subgenome in the independent hybridizations that gave rise to modern bread wheat. Through k-mer-based association mapping, we identified discrete genomic regions with candidate genes for disease and pest resistance and demonstrated their functional transfer into wheat by transgenesis and wide crossing, including the generation of a library of hexaploids incorporating diverse Ae. tauschii genomes. Exploiting the genomic diversity of the Ae. tauschii ancestral diploid genome permits rapid trait discovery and functional genetic validation in a hexaploid background amenable to breeding.
Autores: Kumar Gaurav, Sanu Arora, Paula Silva, Javier Sánchez-Martín, Richard Horsnell, Liangliang Gao, Gurcharn S. Brar, Victoria Widrig, W. John Raupp, Narinder Singh, Shuangye Wu, Sandip M. Kale, Catherine Chinoy, Paul Nicholson, Jesús Quiroz-Chávez, James Simmonds, Sadiye Hayta, Mark A. Smedley, Wendy Harwood, Suzannah Pearce, David Gilbert, Ngonidzashe Kangara, Catherine Gardener, Macarena Forner-Martínez, Jiaqian Liu, Guotai Yu, Scott A. Boden, Attilio Pascucci, Sreya Ghosh, Amber N. Hafeez, Tom O?Hara, Joshua Waites, Jitender Cheema, Burkhard Steuernagel, Mehran Patpour, Annemarie Fejer Justesen, Shuyu Liu, Jackie C. Rudd, Raz Avni, Amir Sharon, Barbara Steiner, Rizky Pasthika Kirana, Hermann Buerstmayr, Ali A. Mehrabi, Firuza Y. Nasyrova, Noam Chayut, Oadi Matny, Brian J. Steffenson, Nitika Sandhu, Parveen Chhuneja, Evans Lagudah, Ahmed F. Elkot, Simon Tyrrell, Xingdong Bian, Robert P. Davey, Martin Simonsen, Leif Schauser, Vijay K. Tiwari, H. Randy Kutcher, Pierre Hucl, Aili Li, Deng-Cai Liu, Long Mao, Steven Xu, Gina Brown-Guedira, Justin Faris, Jan Dvorak, Ming-Cheng Luo, Ksenia Krasileva, Thomas Lux, Susanne Artmeier, Klaus F. X. Mayer, Cristobal Uauy, Martin Mascher, Alison R. Bentley, Beat Keller, Jesse Poland & Brande B. H. Wulff MenosAbstract:
Aegilops tauschii, the diploid wild progenitor of the D subgenome of bread wheat, is a reservoir of genetic diversity for improving bread wheat performance and environmental resilience. Here we sequenced 242 Ae. tauschii accessions and compared them to the wheat D subgenome to characterize genomic diversity. We found that a rare lineage of Ae. tauschii geographically restricted to present-day Georgia contributed to the wheat D subgenome in the independent hybridizations that gave rise to modern bread wheat. Through k-mer-based association mapping, we identified discrete genomic regions with candidate genes for disease and pest resistance and demonstrated their functional transfer into wheat by transgenesis and wide crossing, including the generation of a library of hexaploids incorporating diverse Ae. tauschii genomes. Exploiting the genomic diversity of the Ae. tauschii ancestral diploid genome permits rapid trait discovery and functional genetic validation in a hexaploid background amenable to breeding.
Autores: Kumar Gaurav, Sanu Arora, Paula Silva, Javier Sánchez-Martín, Richard Horsnell, Liangliang Gao, Gurcharn S. Brar, Victoria Widrig, W. John Raupp, Narinder Singh, Shuangye Wu, Sandip M. Kale, Catherine Chinoy, Paul Nicholson, Jesús Quiroz-Chávez, James Simmonds, Sadiye Hayta, Mark A. Smedley, Wendy Harwood, Suzannah Pearce, David Gilbert, Ngonidzashe Kangara, Catherine Gardener, Macarena Forner-Martínez, Jiaqian Liu, Guotai Yu, Scott A. Boden, Attilio Pas... Presentar Todo |
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Palabras claves : |
Hexaploid bread; WHEAT. |
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Thesagro : |
MEJORAMIENTO GENETICO; TRITICUM AESTIVUM. |
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Asunto categoría : |
-- |
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URL : |
http://www.ainfo.inia.uy/digital/bitstream/item/16672/1/s41587-021-01058-4-1.pdf
https://www.nature.com/articles/s41587-021-01058-4.pdf
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Marc : |
LEADER 04120naa a2200325 a 4500
001 1062533
005 2022-09-02
008 2022 bl uuuu u00u1 u #d
024 7 $a10.1038/s41587-021-01058-4$2DOI
100 1 $aGAURAV, K.
245 $aPopulation genomic analysis of Aegilops tauschii identifies targets for bread wheat improvement.$h[electronic resource]
260 $c2022
520 $aAbstract: Aegilops tauschii, the diploid wild progenitor of the D subgenome of bread wheat, is a reservoir of genetic diversity for improving bread wheat performance and environmental resilience. Here we sequenced 242 Ae. tauschii accessions and compared them to the wheat D subgenome to characterize genomic diversity. We found that a rare lineage of Ae. tauschii geographically restricted to present-day Georgia contributed to the wheat D subgenome in the independent hybridizations that gave rise to modern bread wheat. Through k-mer-based association mapping, we identified discrete genomic regions with candidate genes for disease and pest resistance and demonstrated their functional transfer into wheat by transgenesis and wide crossing, including the generation of a library of hexaploids incorporating diverse Ae. tauschii genomes. Exploiting the genomic diversity of the Ae. tauschii ancestral diploid genome permits rapid trait discovery and functional genetic validation in a hexaploid background amenable to breeding. Autores: Kumar Gaurav, Sanu Arora, Paula Silva, Javier Sánchez-Martín, Richard Horsnell, Liangliang Gao, Gurcharn S. Brar, Victoria Widrig, W. John Raupp, Narinder Singh, Shuangye Wu, Sandip M. Kale, Catherine Chinoy, Paul Nicholson, Jesús Quiroz-Chávez, James Simmonds, Sadiye Hayta, Mark A. Smedley, Wendy Harwood, Suzannah Pearce, David Gilbert, Ngonidzashe Kangara, Catherine Gardener, Macarena Forner-Martínez, Jiaqian Liu, Guotai Yu, Scott A. Boden, Attilio Pascucci, Sreya Ghosh, Amber N. Hafeez, Tom O?Hara, Joshua Waites, Jitender Cheema, Burkhard Steuernagel, Mehran Patpour, Annemarie Fejer Justesen, Shuyu Liu, Jackie C. Rudd, Raz Avni, Amir Sharon, Barbara Steiner, Rizky Pasthika Kirana, Hermann Buerstmayr, Ali A. Mehrabi, Firuza Y. Nasyrova, Noam Chayut, Oadi Matny, Brian J. Steffenson, Nitika Sandhu, Parveen Chhuneja, Evans Lagudah, Ahmed F. Elkot, Simon Tyrrell, Xingdong Bian, Robert P. Davey, Martin Simonsen, Leif Schauser, Vijay K. Tiwari, H. Randy Kutcher, Pierre Hucl, Aili Li, Deng-Cai Liu, Long Mao, Steven Xu, Gina Brown-Guedira, Justin Faris, Jan Dvorak, Ming-Cheng Luo, Ksenia Krasileva, Thomas Lux, Susanne Artmeier, Klaus F. X. Mayer, Cristobal Uauy, Martin Mascher, Alison R. Bentley, Beat Keller, Jesse Poland & Brande B. H. Wulff
650 $aMEJORAMIENTO GENETICO
650 $aTRITICUM AESTIVUM
653 $aHexaploid bread
653 $aWHEAT
700 1 $aARORA, S.
700 1 $aSILVA, P.
700 1 $aSÁNCHEZ-MARTÍN, J.
700 1 $aHORSNELL,R.
700 1 $aGAO, L.
700 1 $aBRAR ,G.S.
700 1 $aWIDRIG,V.
700 1 $aJOHN RAUPP,W.
700 1 $aSINGH, N.
700 1 $aWU, S.
700 1 $aKALE, S.M.
700 1 $aCHINOY, C.; NICHOLSON, P.; QUIROZ-CHÁVEZ, J.; SIMMONDS, J.; HAYTA, S.; SMEDLEY, M. A; HARWOOD, W.; PEARCE, S.; GILBERT, D.; KANGARA, N.; GARDENER, C.; FORNER-MARTÍNEZ, M.; LIU, J.; YU, G.; BODEN, S.A.; PASCUCCI, A.; GHOSH, S.; HAFEEZ, A.N.; O'HARA, T.; WAITES, J.; CHEEMA, J.; STEUERNAGEL, B.; PATPOUR, M.; JUSTESEN, A.F.; LIU, S.; RUDD, J. C.; AVNI, R.; SHARON, A.R; STEINER, B.; KIRANA, R.P.; BUERSTMAYR, H.; MEHRABI, A.A.; NASYROVA, F.Y.; CHAYUT, N.; MATNY, O.; STEFFENSON, B. J.; SANDHU, N.; CHHUNEJA, P.; LAGUDAH, E.; ELKOT, A.F.; TYRRELL, S.; BIAN, X.; DAVEY, R.P.; SIMONSEN, M.; SCHAUSER, L.; TIWARI, V.K.; RANDY KUTCHER, H.; HUCL, P.; LI, A.; LIU, D.C.; MAO, L.; XU, S.; BROWN-GUEDIRA, G.; FARIS, J.; DVORAK, J.; LUO, M.CH.; KRASILEVA, K.; LUX, T.; ARTMEIER, S.; MAYER, K. F. X.; UAUY, C.; MASCHER, M.; BENTLEY, A.R.; KELLER, B.; POLAND, J.; WULFF, B. B. H.
773 $tNature Biotechnology, Volume 40, Pages 422-431, March 2022. Open Access. doi: https://doi.org/10.1038/s41587-021-01058-4
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Registro original : |
INIA La Estanzuela (LE) |
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 | Acceso al texto completo restringido a Biblioteca INIA Las Brujas. Por información adicional contacte bibliolb@inia.org.uy. |
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Registro completo
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Biblioteca (s) : |
INIA Las Brujas. |
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Fecha actual : |
09/08/2019 |
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Actualizado : |
09/08/2019 |
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Tipo de producción científica : |
Artículos en Revistas Indexadas Internacionales |
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Circulación / Nivel : |
Internacional - -- |
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Autor : |
BERRUETA, C.; BORGES, A.; GIMÉNEZ, G.; DOGLIOTTI, S. |
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Afiliación : |
MARIA CECILIA BERRUETA MOREIRA, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; ALEJANDRA BORGES, Universidad de la República (UdelaR)/ Facultad de Agronomía; GUSTAVO GIMÉNEZ FRANQUEZ, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; SANTIAGO DOGLIOTTI, Universidad de la República (UdelaR)/ Facultad de Agronomía. |
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Título : |
On-farm diagnosis for greenhouse tomato in south Uruguay: Explaining yield variability and ranking of determining factors. |
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Fecha de publicación : |
2019 |
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Fuente / Imprenta : |
European Journal of Agronomy, Octobre 2019, Volume 110, 125932. |
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ISSN : |
1161-0301 |
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DOI : |
10.1016/j.eja.2019.125932 |
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Idioma : |
Inglés |
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Notas : |
Article history: Received: 7 November 2018 / Received in revised form: 15 July 2019 / Accepted: 25 July 2019. |
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Contenido : |
ABSTRACT.
Knowledge about contributing factors to yield loss is essential for sustainable intensification of agriculture, which has the objective to increase both, yield and environmental sustainability. This study aimed to identify strategies to reduce the distance between under-performing and best-yielding greenhouse tomato crops in the south region of Uruguay. Gap to attainable yield was described and main causes of yield variability were explored by combining regional agronomic diagnosis and yield gap analysis. A sample of 110 tomato greenhouses within 23 farms during 2014/15 and 2015/16 were assessed. The variables assessed were classified in four
groups: growth defining, growth limiting, growth reducing factors and yield components. Yield ranged from 0.9 to 24.3 kg m−2. Cumulated photosynthetically active radiation (PAR) intercepted was the most correlated with yield. We analyzed two complementary ways of increasing yield: (1) modifying growth-defining factors to increase cumulated PAR intercepted and attainable yield, and (2) modifying growth-limiting and reducing factors responsible for the gap to attainable yield at a given level of cumulated PAR. PAR interception could be increased by adjusting transplanting dates to modify daily incident radiation, improving transmissivity of greenhouses and fraction PAR intercepted by canopy. We classified crops in three groups of cumulated PAR intercepted and yield. The average gap between actual and attainable yield was 34%. The strategy to close that gap differed among groups, but K nutrition was common to all. Results from this study allowed us to deliver relevant and actionable information to better inform discussions among farmers and their technical advisors.
© 2019 Elsevier B.V. All rights reserved. MenosABSTRACT.
Knowledge about contributing factors to yield loss is essential for sustainable intensification of agriculture, which has the objective to increase both, yield and environmental sustainability. This study aimed to identify strategies to reduce the distance between under-performing and best-yielding greenhouse tomato crops in the south region of Uruguay. Gap to attainable yield was described and main causes of yield variability were explored by combining regional agronomic diagnosis and yield gap analysis. A sample of 110 tomato greenhouses within 23 farms during 2014/15 and 2015/16 were assessed. The variables assessed were classified in four
groups: growth defining, growth limiting, growth reducing factors and yield components. Yield ranged from 0.9 to 24.3 kg m−2. Cumulated photosynthetically active radiation (PAR) intercepted was the most correlated with yield. We analyzed two complementary ways of increasing yield: (1) modifying growth-defining factors to increase cumulated PAR intercepted and attainable yield, and (2) modifying growth-limiting and reducing factors responsible for the gap to attainable yield at a given level of cumulated PAR. PAR interception could be increased by adjusting transplanting dates to modify daily incident radiation, improving transmissivity of greenhouses and fraction PAR intercepted by canopy. We classified crops in three groups of cumulated PAR intercepted and yield. The average gap between actual and attainable yield was 3... Presentar Todo |
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Palabras claves : |
CROP MANAGEMENT; CROPPING SYSTEMS; On-farm regional agronomic diagnosis; REGRESSION TREES; SOLANUM LYCOPERSICUM. |
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Asunto categoría : |
F01 Cultivo |
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Marc : |
LEADER 02693naa a2200253 a 4500
001 1059998
005 2019-08-09
008 2019 bl uuuu u00u1 u #d
022 $a1161-0301
024 7 $a10.1016/j.eja.2019.125932$2DOI
100 1 $aBERRUETA, C.
245 $aOn-farm diagnosis for greenhouse tomato in south Uruguay$bExplaining yield variability and ranking of determining factors.$h[electronic resource]
260 $c2019
500 $aArticle history: Received: 7 November 2018 / Received in revised form: 15 July 2019 / Accepted: 25 July 2019.
520 $aABSTRACT. Knowledge about contributing factors to yield loss is essential for sustainable intensification of agriculture, which has the objective to increase both, yield and environmental sustainability. This study aimed to identify strategies to reduce the distance between under-performing and best-yielding greenhouse tomato crops in the south region of Uruguay. Gap to attainable yield was described and main causes of yield variability were explored by combining regional agronomic diagnosis and yield gap analysis. A sample of 110 tomato greenhouses within 23 farms during 2014/15 and 2015/16 were assessed. The variables assessed were classified in four groups: growth defining, growth limiting, growth reducing factors and yield components. Yield ranged from 0.9 to 24.3 kg m−2. Cumulated photosynthetically active radiation (PAR) intercepted was the most correlated with yield. We analyzed two complementary ways of increasing yield: (1) modifying growth-defining factors to increase cumulated PAR intercepted and attainable yield, and (2) modifying growth-limiting and reducing factors responsible for the gap to attainable yield at a given level of cumulated PAR. PAR interception could be increased by adjusting transplanting dates to modify daily incident radiation, improving transmissivity of greenhouses and fraction PAR intercepted by canopy. We classified crops in three groups of cumulated PAR intercepted and yield. The average gap between actual and attainable yield was 34%. The strategy to close that gap differed among groups, but K nutrition was common to all. Results from this study allowed us to deliver relevant and actionable information to better inform discussions among farmers and their technical advisors. © 2019 Elsevier B.V. All rights reserved.
653 $aCROP MANAGEMENT
653 $aCROPPING SYSTEMS
653 $aOn-farm regional agronomic diagnosis
653 $aREGRESSION TREES
653 $aSOLANUM LYCOPERSICUM
700 1 $aBORGES, A.
700 1 $aGIMÉNEZ, G.
700 1 $aDOGLIOTTI, S.
773 $tEuropean Journal of Agronomy, Octobre 2019, Volume 110, 125932.
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