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Registros recuperados : 165 | |
61. | | VERA, B.; NAVAJAS, E.; DE BARBIERI, I.; VAN LIER, E.; CIAPPESONI, G. Agroecological breeding: genomic evaluation in Australian Merico. [abstract]. In: REDBIO México 2022, XI Congreso, "Biotecnología productiva y sostenible". Libro de resúmenes. 12-14 octubre 2022, Yucatán, México. p.29 This project received funding from SMARTER Horizon 2020 number 772787, RUMIAR, CSIC I+D-2018-287.Biblioteca(s): INIA Las Brujas. |
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63. | | VERA, B.; DE BARBIERI, I.; FERREIRA, G.; NAVAJAS, E.; CARRACELAS, B.; CIAPPESONI, G. Asignación de parentesco y detección de superfecundación heteropaternal en ovinos Merino Australiano mediante paneles de SNP. In: AUPA, Proceedings del VII Congreso Uruguayo de Producción Animal. Sección Cambio Climático y Producción Sostenible (Climate Change Section), 14 y 15 diciembre 2021. Archivos Latinoamericanos de Producción Animal, 29(Supl.1), p.85-87. (Archivos Latinoamericanos de Producción Animal, Vol.29, Supl.1) Corresponding author: B. Vera, Instituto Nacional de Investigación Agropecuaria (INIA), Ruta 48 km 10, Las Brujas (Uruguay), mailto: bvera@inia.org.uyBiblioteca(s): INIA Las Brujas. |
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64. | | DE BARBIERI, I.; FERREIRA, G.; RAMOS, Z.; NAVAJAS, E.; CIAPPESONI, G. Consequences of contrasting feed efficiency as lamb on later ewe performance. [Abstract] In: Annual Meeting of the European Federation of Animal Science (EAAP), 73., Porto, Portugal, 5-8 September 2022. Book of Abstracts, 73., Session 68, Theatre 4, p.674. Conference website: https://eaap2022.org/Biblioteca(s): INIA Las Brujas. |
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65. | | NAVAJAS, E.; MACEDO, F.; LEMA, O.M.; LUZARDO, S.; AGUILAR, I. Accuracy of genomic predictions for carcass and meat quality traits in the Uruguayan Hereford breed. Volume Species - Bovine (beef) 1, p. 636. In: Proceedings of the World Congress on Genetics Applied to Livestock Production, 11., Aotea Centre Auckland, New Zealand: WCGALP, ICAR, 11-16 feb 2018. 6 p. Acknowledgements: This work was supported by the Agencia Nacional de Investigación e Innovación (ANII) (grants RTS_1_2012_1_3489 and FMV_1_2011_1_6671), Instituto Nacional de Investigación Agropecuaria (INIA), Sociedad de Criadores de...Biblioteca(s): INIA Las Brujas. |
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66. | | PRAVIA, M.I.; NAVAJAS, E.; MACEDO, F.; CLARIGET, J.M.; LUZARDO, S. Association between feed efficiency and carcass and meat quality traits in Hereford steers. Volume Electronic Poster Session - Biology - Feed Intake and Efficiency 1, p. 604. In: Proceedings of the World Congress on Genetics Applied to Livestock Production, 11., Aotea Centre Auckland, New Zealand: WCGALP, ICAR, 11-16 feb 2018. Acknowledgements: This work was supported by the Agencia Nacional de Investigación e Innovación (ANII) (grant RTS_1_2012_1_3489), Instituto Nacional de Investigación Agropecuaria (INIA), Sociedad de Criadores de Hereford (SCH), Instituto...Biblioteca(s): INIA Las Brujas. |
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67. | | NAVAJAS, E.; CIAPPESONI, G.; GIMENO, D.; VELAZCO, J.I.; DE BARBIERI, I. Association of genetic resistance to internal nematodes and production traits on feed efficiency and methane emissions in Corriedale lambs. [37]- Part 5 - Novel traits: environment and greenhouse gas. In: Proceedings of the World Congress on Genetics Applied to Livestock Production (WCGALP), 12., Rotterdam, the Netherlands, 3-8 July 2022. doi: https://doi.org/10.3920/978-90-8686-940-4_37 195-198. Article history: Published online: February 9, 2023. -- Corresponding author: Gabriel Ciappesoni, email: ciappesoni@inia.org.uy -- Acknowledgements: This project has received funding from the European Union's Horizon 2020 research and...Biblioteca(s): INIA Las Brujas. |
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71. | | NAVAJAS, E.; RAVAGNOLO, O.; AGUILAR, I.; CIAPPESONI, G.; PERAZA, P.; DALLA RIZZA, M.; MONTOSSI, F. Desarrollo de una plataforma en selección genómica enfocada en el progreso genético animal. ln: Jornada técnica, VI Jornada de agrobiotecnología. INIA Las Brujas, 20 de octubre de 2012 Conocimiento intensivo para el sector productivo: situación actual y perspectivas. Canelones (UY): INIA, 2012. 10-12 (Serie Actividades de Difusión; 698)Biblioteca(s): INIA Las Brujas. |
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72. | | PIERUCCIONI, F.; SAURA, M.; VILLANUEVA, B.; MACEDO, F.; CIAPPESONI, G.; NAVAJAS, E. Desequilibrio de ligamiento y tamaño efectivo en los ovinos criollos uruguayos del Parque Nacional de San Miguel. GGM 17 - COMUNICACIONES LIBRES - GGM. GENÓMICA Y GENÉTICA MOLECULAR In: JOURNAL OF BASIC & APPLIED GENETICS, 2016, Vol.27, Iss. 1 (Supp.). XVI LATIN AMERICAN CONGRESS OF GENETICS, IV CONGRESS OF THE URUGUAYAN SOCIETY OF GENETICS, XLIX ANNUAL MEETING OF THE GENETICS SOCIETY OF CHILE, XLV ARGENTINE CONGRESS OF GENETICS, 9-12 October 2016. PROCEEDINGS. Montevideo (Uruguay): SAG, 2016. p. 263Biblioteca(s): INIA Las Brujas. |
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76. | | MARÍN, M.F.; NAYA, H.; ESPASANDIN, A.C.; NAVAJAS, E.; DEVINCENZI, T.; CARRIQUIRY, M. Energy efficiency, reproductive performance, and metabolic parameters of grazing Hereford heifers. Livestock Science, 2024, Volume 279, e105389. https://doi.org/10.1016/j.livsci.2023.105389 Article history: Received 21 September 2023; Received in revised form 9 November 2023; Accepted 1 December 2023; Available online 2 December 2023. -- Correspondence: Marín, M.F.; Departamento de Producción Animal y Pasturas, Facultad de...Biblioteca(s): INIA Las Brujas. |
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78. | | FERREIRA, G.; CIAPPESONI, G.; NAVAJAS, E.; GIORELLO, D.; VELAZCO, J.I.; BANCHERO, G.; DE BARBIERI, I. Evaluación de días de medición necesarios para estimar el consumo residual del alimento en ovinos. [Resumen]. Congreso de la Asociación Latinoamericana de Especialistas en Pequeños Rumiantes y Camélidos Sudamericanos (ALEPRyCS), 11., 4-7 de junio, Querétaro, 2019. Rev. Acad. Ciênc. Anim., v. 17(Supl 1):249, 2019. p. 249Biblioteca(s): INIA Tacuarembó. |
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79. | | BLUMETTO, O.; DE BARBIERI, I.; NAVAJAS, E.; BAETHGEN, W.; BECOÑA, G.; CIAPPESONI, G. Ganadería regenerativa en Uruguay. Montevideo (UY): INIA, 2023. 23 p. (INIA, Edición Especial). Revisión técnica: Ing. Agr. PhD Verónica Ciganda y DMV PhD Georgget Banchero. -- Esta publicación deriva del trabajo de investigación del Área de Recursos Naturales, Producción y Ambiente, en el marco del Sistema Ganadero Extensivo.Biblioteca(s): INIA Las Brujas. |
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80. | | MARÍN, M.F.; NAYA, H.; DEVINCENZI, T.; NAVAJAS, E.; ESPASANDIN, A. C.; CARRIQUIRY, M. Heart rate of grazing Hereford heifers classified by paternal RFI. [Poster] EAAP - 72nd Annual Meeting, Davos, Switzerland. Session 23, Poster 11. In: Annual Meeting of the European Federation of Animal Science (EAAP), 72., 30 August - 3 September 2021, Davos, Switzerland. Book of abstracts. Wageningen, NL: WAP, 2021. p.278. doi: https://doi.org/10.3920/978-90-8686-918-3 Conference website: www.eaap2021.orgBiblioteca(s): INIA Las Brujas. |
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Registros recuperados : 165 | |
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Registro completo
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Biblioteca (s) : |
INIA Las Brujas. |
Fecha actual : |
30/08/2022 |
Actualizado : |
30/08/2022 |
Tipo de producción científica : |
Artículos en Revistas Indexadas Internacionales |
Circulación / Nivel : |
Internacional - -- |
Autor : |
CARRACELAS, B.; NAVAJAS, E.; VERA, B.; CIAPPESONI, G. |
Afiliación : |
EMERITA BEATRIZ CARRACELAS MARQUEZ, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; ELLY ANA NAVAJAS VALENTINI, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; BRENDA VERA, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; CARLOS GABRIEL CIAPPESONI SCARONE, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay. |
Título : |
Genome-wide association study of parasite resistance to gastrointestinal nematodes in Corriedale sheep. |
Fecha de publicación : |
2022 |
Fuente / Imprenta : |
Genes, 2022, vol. 13, issue 9, 1548. OPEN ACCESS. doi: https://doi.org/10.3390/genes13091548 |
ISSN : |
e-ISSN 2073-4425 |
DOI : |
10.3390/genes13091548 |
Idioma : |
Inglés |
Notas : |
Article history: Received 25 May 2022; Revised 19 August 2022; Accepted 23 August 2022; Published 27 August 2022.
Correspondence: gciappesoni@inia.org.uy -- Academic Editor: Qiuyue Liu.
License: This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
This article belongs to the Collection Feature Papers in Animal Genetics and Genomics: https://www.mdpi.com/journal/genes/topical_collections/feature_paper_animal |
Contenido : |
ABSTRACT.- Selection of genetically resistant animals is one alternative to reduce the negative impact of gastrointestinal nematodes (GIN) on sheep production. The aim of this study was to identify genomic regions associated with GIN resistance in Corriedale sheep by single-step genome-wide association studies (ssGWAS) using 170, 507 and 50K single nucleotide polymorphisms (SNPs). Analysis included 19,547 lambs with faecal egg counts (FEC) records, a pedigree file of 40,056 animals and 454, 711 and 383 genotypes from 170, 507 and 50K SNPs, respectively. Genomic estimated breeding values (GEBV) were obtained with single-step genomic BLUP methodology (ssGBLUP), using a univariate animal model, which included contemporary group, type of birth and age of dam as class fixed effects and age at FEC recording as covariate. The SNP effects as wells as p-values were estimated with POSTGSF90 program. Significance level was defined by a chromosome-wise False Discovery Rate of 5%. Significant genomic regions were identified in chromosomes 1, 3, 12 and 19 with the 170 SNP set, in chromosomes 7, 12 and 24 using the 507 SNP chip and only in chromosome 7 with the 50K SNP chip. Candidate genes located in these regions, using Oar_v4.0 as reference genome, were TIMP3, TLR5, LEPR and TLR9 (170 SNPs), SYNDIG1L and MGRN1 (507 SNP chip) and INO80, TLN2, TSHR and EIF2AK4 (50K SNP chip). These results validate genomic regions associated with FEC previously identified in Corriedale and other breeds and report new candidate regions for further investigation. © 2022 by the authors. Licensee MDPI, Basel, Switzerland. MenosABSTRACT.- Selection of genetically resistant animals is one alternative to reduce the negative impact of gastrointestinal nematodes (GIN) on sheep production. The aim of this study was to identify genomic regions associated with GIN resistance in Corriedale sheep by single-step genome-wide association studies (ssGWAS) using 170, 507 and 50K single nucleotide polymorphisms (SNPs). Analysis included 19,547 lambs with faecal egg counts (FEC) records, a pedigree file of 40,056 animals and 454, 711 and 383 genotypes from 170, 507 and 50K SNPs, respectively. Genomic estimated breeding values (GEBV) were obtained with single-step genomic BLUP methodology (ssGBLUP), using a univariate animal model, which included contemporary group, type of birth and age of dam as class fixed effects and age at FEC recording as covariate. The SNP effects as wells as p-values were estimated with POSTGSF90 program. Significance level was defined by a chromosome-wise False Discovery Rate of 5%. Significant genomic regions were identified in chromosomes 1, 3, 12 and 19 with the 170 SNP set, in chromosomes 7, 12 and 24 using the 507 SNP chip and only in chromosome 7 with the 50K SNP chip. Candidate genes located in these regions, using Oar_v4.0 as reference genome, were TIMP3, TLR5, LEPR and TLR9 (170 SNPs), SYNDIG1L and MGRN1 (507 SNP chip) and INO80, TLN2, TSHR and EIF2AK4 (50K SNP chip). These results validate genomic regions associated with FEC previously identified in Corriedale and other breeds an... Presentar Todo |
Palabras claves : |
FEC; Genomic regions; SsGWAS. |
Asunto categoría : |
L01 Ganadería |
URL : |
http://www.ainfo.inia.uy/digital/bitstream/item/16636/1/genes-13-01548-v2.pdf
|
Marc : |
LEADER 02850naa a2200229 a 4500 001 1063548 005 2022-08-30 008 2022 bl uuuu u00u1 u #d 022 $ae-ISSN 2073-4425 024 7 $a10.3390/genes13091548$2DOI 100 1 $aCARRACELAS, B. 245 $aGenome-wide association study of parasite resistance to gastrointestinal nematodes in Corriedale sheep.$h[electronic resource] 260 $c2022 500 $aArticle history: Received 25 May 2022; Revised 19 August 2022; Accepted 23 August 2022; Published 27 August 2022. Correspondence: gciappesoni@inia.org.uy -- Academic Editor: Qiuyue Liu. License: This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). This article belongs to the Collection Feature Papers in Animal Genetics and Genomics: https://www.mdpi.com/journal/genes/topical_collections/feature_paper_animal 520 $aABSTRACT.- Selection of genetically resistant animals is one alternative to reduce the negative impact of gastrointestinal nematodes (GIN) on sheep production. The aim of this study was to identify genomic regions associated with GIN resistance in Corriedale sheep by single-step genome-wide association studies (ssGWAS) using 170, 507 and 50K single nucleotide polymorphisms (SNPs). Analysis included 19,547 lambs with faecal egg counts (FEC) records, a pedigree file of 40,056 animals and 454, 711 and 383 genotypes from 170, 507 and 50K SNPs, respectively. Genomic estimated breeding values (GEBV) were obtained with single-step genomic BLUP methodology (ssGBLUP), using a univariate animal model, which included contemporary group, type of birth and age of dam as class fixed effects and age at FEC recording as covariate. The SNP effects as wells as p-values were estimated with POSTGSF90 program. Significance level was defined by a chromosome-wise False Discovery Rate of 5%. Significant genomic regions were identified in chromosomes 1, 3, 12 and 19 with the 170 SNP set, in chromosomes 7, 12 and 24 using the 507 SNP chip and only in chromosome 7 with the 50K SNP chip. Candidate genes located in these regions, using Oar_v4.0 as reference genome, were TIMP3, TLR5, LEPR and TLR9 (170 SNPs), SYNDIG1L and MGRN1 (507 SNP chip) and INO80, TLN2, TSHR and EIF2AK4 (50K SNP chip). These results validate genomic regions associated with FEC previously identified in Corriedale and other breeds and report new candidate regions for further investigation. © 2022 by the authors. Licensee MDPI, Basel, Switzerland. 653 $aFEC 653 $aGenomic regions 653 $aSsGWAS 700 1 $aNAVAJAS, E. 700 1 $aVERA, B. 700 1 $aCIAPPESONI, G. 773 $tGenes, 2022, vol. 13, issue 9, 1548. OPEN ACCESS. doi: https://doi.org/10.3390/genes13091548
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