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Registro completo
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Biblioteca (s) : |
INIA Las Brujas. |
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Fecha : |
27/07/2022 |
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Actualizado : |
27/02/2023 |
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Tipo de producción científica : |
Trabajos en Congresos/Conferencias |
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Autor : |
LOURENCO, D.; TSURUTA, S.; AGUILAR, I.; MASUDA, Y.; BERMANN, M.; LEGARRA, A.; MISZTAL, I. |
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Afiliación : |
D. LOURENCO, University of Georgia, Department of Animal and Dairy Science, 30602, Athens, GA, USA; S. TSURUTA, University of Georgia, Department of Animal and Dairy Science, 30602, Athens, GA, USA; IGNACIO AGUILAR GARCIA, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; Y. MASUDA, Rakuno Gakuen University, 069-8501, Ebetsu, Hokkaido, Japan; M. BERMANN, University of Georgia, Department of Animal and Dairy Science, 30602, Athens, GA, USA; A. LEGARRA, Institut national de recherche pour l'agriculture, l'alimentation et l'environnement, UMR1388 GenPhySE, 31326, Castanet Tolosan, France; I. MISZTAL, University of Georgia, Department of Animal and Dairy Science, 30602, Athens, GA, USA. |
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Título : |
Recent updates in the BLUPF90 software suite. [366]. |
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Complemento del título : |
Part 19 - Methods and tools: software and computing strategies. |
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Fecha de publicación : |
2022 |
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Fuente / Imprenta : |
In: Proceedings of the World Congress on Genetics Applied to Livestock Production (WCGALP), 12., Rotterdam, the Netherlands, 3-8 July 2022. doi: https://doi.org/10.3920/978-90-8686-940-4_366 |
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Páginas : |
1530-1533. |
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DOI : |
10.3920/978-90-8686-940-4_366 |
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Idioma : |
Inglés |
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Notas : |
Article history: Published online: February 9, 2023. -- Corresponding author: D. Lourenco, email: danilino@uga.edu |
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Contenido : |
ABSTRACT.- BLUPF90 is a flexible software suite that estimates variance components, cross-classified and covariate effects, breeding values, accuracies, and SNP effects, among others. It is based on mixed models and focuses mainly on animal breeding and genetics applications. This collection of software is continually under development to incorporate new methods and algorithms, improve efficiency, and broaden usage. A significant change undergoing BLUPF90 is the merge of variance components and breeding values estimation software. Some of the recent developments include the implementation of p-values for SNP effects in single-step GWAS, a new algorithm to approximate reliability or accuracy of GEBV, the inclusion of metafounders or unknown parent groups in ssGBLUP to set the base populations, and several optimizations to speed up computing time with many genotyped animals. BLUPF90 is a resourceful collection of efficient software that handles millions of genotyped animals and dozens of millions of records or individuals in pedigree. |
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Palabras claves : |
BLUP program; BLUPF90 software. |
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Asunto categoría : |
L10 Genética y mejoramiento animal |
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URL : |
http://www.ainfo.inia.uy/digital/bitstream/item/16999/1/978-90-8686-940-4-366.pdf
https://www.wageningenacademic.com/doi/epdf/10.3920/978-90-8686-940-4_366
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Marc : |
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024 7 $a10.3920/978-90-8686-940-4_366$2DOI
100 1 $aLOURENCO, D.
245 $aRecent updates in the BLUPF90 software suite. [366].$h[electronic resource]
260 $aIn: Proceedings of the World Congress on Genetics Applied to Livestock Production (WCGALP), 12., Rotterdam, the Netherlands, 3-8 July 2022. doi: https://doi.org/10.3920/978-90-8686-940-4_366$c8686
300 $a1530-1533.
500 $aArticle history: Published online: February 9, 2023. -- Corresponding author: D. Lourenco, email: danilino@uga.edu
520 $aABSTRACT.- BLUPF90 is a flexible software suite that estimates variance components, cross-classified and covariate effects, breeding values, accuracies, and SNP effects, among others. It is based on mixed models and focuses mainly on animal breeding and genetics applications. This collection of software is continually under development to incorporate new methods and algorithms, improve efficiency, and broaden usage. A significant change undergoing BLUPF90 is the merge of variance components and breeding values estimation software. Some of the recent developments include the implementation of p-values for SNP effects in single-step GWAS, a new algorithm to approximate reliability or accuracy of GEBV, the inclusion of metafounders or unknown parent groups in ssGBLUP to set the base populations, and several optimizations to speed up computing time with many genotyped animals. BLUPF90 is a resourceful collection of efficient software that handles millions of genotyped animals and dozens of millions of records or individuals in pedigree.
653 $aBLUP program
653 $aBLUPF90 software
700 1 $aTSURUTA, S.
700 1 $aAGUILAR, I.
700 1 $aMASUDA, Y.
700 1 $aBERMANN, M.
700 1 $aLEGARRA, A.
700 1 $aMISZTAL, I.
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INIA Las Brujas (LB) |
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| 6. |  | PICASSO, V.; LIZARRALDE, C.; MOLINA, C.; BARTABURU, D.; MORALES, H.; ASTIGARRAGA, L. A quantitative assessment of robustness to drought in livestock grazing systems in Uruguay. In: INTERNATIONAL CONFERENCE ON GLOBAL FOOD SECURITY, 1., Noordwijkerhout, NL. [Poster session 3: sustainable intensification of food production systems]. [Dordrecht]: Elsevier, 2013.| Biblioteca(s): INIA La Estanzuela. |
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| 8. | | VICENTE-SERRANO, S.M.; BIDEGAIN, M.; TOMAS-BURGUERA, M.; DOMÍNGUEZ-CASTRO, F.; EL KENAWY, A.; MCVICAR, T.R.; AZORIN-MOLINA, C.; LÓPEZ-MORENO, J.I.; NIETO, R.; GIMENO, L.; GIMÉNEZ, A. A comparison of temporal variability of observed and model-based pan evaporation over Uruguay (1973?2014). International Journal of Climatology, 2017 Article history: Received 16 March 2017; Revised 8 May 2017; Accepted 23 May 2017| Tipo: Artículos en Revistas Indexadas Internacionales | Circulación / Nivel : Internacional - -- |
| Biblioteca(s): INIA Las Brujas. |
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| 9. | | AREOSA, P.; BONE, G.; GRAU, M.; RODRÍGUEZ, N.; MOLINA, C.; HEGEDUS, P. DE; ÁLVAREZ, J.; SCARPITTA, N.; BARBAT, R.; COPPOLA, B.; BARRETO, S.; LLOVET, P.; AYALA, W.; LAPETINA, J. FPTA 343: co-innovación para el desarrollo sustentable de la ganadería familiar en las Sierras del Este. Revista INIA Uruguay, 2019, no.57, p.73-77. (Revista INIA; 57)| Tipo: Artículos en Revistas Agropecuarias |
| Biblioteca(s): INIA Treinta y Tres. |
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| 10. | | BARTABURU, D.; MORALES, H.; DIÉGUEZ, F.; LIZARRALDE, C.; QUIÑONES, A.; PEREIRA, M.; MOLINA, C.; MONTES, E.; MODERNEL, P.; TAKS, J.; DE TORRES, F.; TERRA, R.; CRUZ, G.; ASTIGARRAGA, L.; PICASSO, V. Sensibilidad y capacidad adaptativa de los agro-ecosistemas [sic] frente a los efectos del cambio climático: 3.2 ganadería. In: OYHANTÇABAL, W.; SANCHO, D.; GALVÁN, M. (Ed.). Resultado del proyecto: TCP/URU/3302 Nuevas Políticas para la Adaptación de la Agricultura al Cambio Climático. Montevideo, UY: FAO-MGAP, 2013. p. 103-133. (Clima de Cambios: Nuevos Desafíos de Adaptación en Uruguay: Compilado)| Tipo: Capítulo en Libro Técnico-Científico |
| Biblioteca(s): INIA La Estanzuela; INIA Treinta y Tres. |
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| Registros recuperados : 10 | |
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