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| Registros recuperados : 47 | |
| 21. |  | QUERO, C.; FERNANDEZ, S.; BRANDARIZ, S.B.; SIMONDI, S.; GUTIÉRREZ, L. Herramientas de análisis y visualización genómica. MV 10 - COMUNICACIONES LIBRES - MV. MEJORAMIENTO VEGETAL In: JOURNAL OF BASIC & APPLIED GENETICS, 2016, Vol.27, Iss. 1 (Supp.). XVI LATIN AMERICAN CONGRESS OF GENETICS, IV CONGRESS OF THE URUGUAYAN SOCIETY OF GENETICS, XLIX ANNUAL MEETING OF THE GENETICS SOCIETY OF CHILE, XLV ARGENTINE CONGRESS OF GENETICS, 9-12 October 2016. PROCEEDINGS. Montevideo (Uruguay): SAG, 2016. p. 285| Biblioteca(s): INIA Las Brujas. |
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| 25. | | QUERO, G.; SIMONDI, S.; CERETTA, S.; OTERO, A.; GARAYCOCHEA, S.; FERNANDEZ, S.; BORSANI, O.; BONNECARRERE, V. An integrative analysis of yield stability for a GWAS in a small soybean breeding population. Crop Science, May 2021, volume 61, issue 3, pages 19003-1914. Doi: https://doi.org/10.1002/csc2.20490 Article history: Received, 3 November 2020; Accepted, 11 February 2021; Published online, 14 April 2021.
Associate Editor: Junping Chen.
The authors thank Edgardo Rey and Wanda Iriarte for technical assistance in field experiment and...| Biblioteca(s): INIA Las Brujas. |
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| 26. | | MEDEROS, A.; CARRACELAS, B.; MINHO, A.P.; FERNÁNDEZ, S.; SÁNCHEZ, J. Prevalence and Factors Associated with Anthelmintic Resistance in Gastrointestinal Nematodes of Cattle: A Systematic Review and Meta-analysis. Journal of Veterinary Medicine and Health, v. 2, no. 2, 2018. OPEN ACCESS. Article history: Received November 21, 2018; Accepted December 02, 2018; Published December 17, 2018.| Biblioteca(s): INIA Tacuarembó. |
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| 27. | | FERNÁNDEZ, S.; FRAGA, M.; SILVERYRA, E.; RABAZA, A.; PLA, M.; ZUNINO, P. Probióticos nativos para terneros bajo sistema de cría intensiva y semi-intensiva: selección de cepas y ensayos de persitencia en el tracto gastrointestinal. In: Jornadas Uruguayas de Buiatría, 44., 2016, Paysandú, UY.; Gianneechini, E.; Elizondo, V. (Ed.).Paysandú: Centro Médico Veterinario de Paysandú/Sociedad Uruguaya de Buiatría, 2016. p.193-195.| Biblioteca(s): INIA La Estanzuela. |
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| 28. | | FERNÁNDEZ, S.; FRAGA, M.; SILVEYRA, E.; TROMBERT, A.N.; RABAZA, A.; PLA, M. Probiotic properties of native Lactobacillus spp. strains for dairy calves. Research article. Beneficial Microbes, April 2018, vol.9, no.4, p. 613 - 624. Artilce history: Received: 12 September 2017 / Accepted: 22 December 2017 / Published Online: April 10, 2018.| Biblioteca(s): INIA Las Brujas. |
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| 29. | | FRAGA, M.; FERNÁNDEZ, S.; PERELMUTER, K.; POMMIÉS, N.; CAJARVILLE, C.; ZUNINO, P. The use of Prevotella bryantii 3C5 for modulation of the ruminal environment in an ovine model. Veterinary Microbiology. Brazilian Journal of Microbiology, November 2018, volume 49, Supplement 1, Pages 101-106. OPEN ACCESS. Article history: Received 24 April 2018 // Accepted 17 July 2018 // Available online 25 August 2018.
Open Access funded by Sociedade Brasileira de Microbiologia. Under a Creative Commons license.| Biblioteca(s): INIA Las Brujas. |
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| 31. | | DINI, Y.; CAJARVILLE, C.; GERE, J.I.; FERNANDEZ. S.; FRAGA, M.; PRAVIA, M.I.; NAVAJAS, E.; CIGANDA, V. Association between residual feed intake and enteric methane emissions in Hereford steers. Translational Animal Science, v. 3, Issue 1, 1 January 2019, Pages 65-72. Doi: https://doi.10.1093/tas/txy111. Article history: Published: 01 October 2018 // Received: 12 September 2018.| Biblioteca(s): INIA La Estanzuela. |
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| 32. | | Fernández Abella, D.; Formoso, D.; Aguerre, J.J.; Hernández, Z.; Buzoni, G.; Galli, C.; Varela, J.P.; Fernández, S. Estudio de la mortalidad embrionaria y fetal en ovinos. IV. Efecto del estrés pluviométrico artificial y natural sobre la actividad ovárica y las pérdidas reproductivas Producción Ovina, 2008, v. 20, p. 31-40| Biblioteca(s): INIA Tacuarembó. |
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| 33. | | MEDEROS, A.; KELTON, D.; PEREGRINE, A.S.; VANLEEUWEN, J.; FERNÁNDEZ, S.; LEBOEUF, A.; MENZIES, P.; MARTIN, R. Evaluation of the utility of subjective clinical parameters for estimating fecal egg counts and packed cell volume in Canadian sheep flocks. Veterinary Parasitology, 2014, v.205, p. 568?574. Article history: Received 12 February 2014 / Received in revised form 8 August 2014 / Accepted 30 August 2014.| Biblioteca(s): INIA Las Brujas; INIA Tacuarembó. |
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| 34. | | MEDEROS, A.; FERNÁNDEZ, S.; VanLEEUWEN, J.; PEREGRINE, A.S.; KELTON, D.; MENZIES, P.; LeBOEUF, A.; MARTIN, R. Prevalence and distribution of gastrointestinal nematodes on 32 organic and conventional commercial sheep farms in Ontario and Quebec, Canada (2006-2008). Veterinary Parasitology, 2010, v. 170, no.3-4, p. 244-252. Article history: Received 5 August 2009 / Received in revised form 28 December 2009 / Accepted 11 February 2010.| Biblioteca(s): INIA Las Brujas. |
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| 35. | | BONNECARRERE, V.; GARAYCOCHEA, S.; GUTIERREZ, L.; ROSAS, J.E.; BERBERIAN, N.; FERNÁNDEZ, S.; MARTÍNEZ, S.; PÉREZ DE VIDA, F.; BLANCO, P.H. Avances de resultados del proyecto mapeo asociativo para la identificación de marcadores asociados a rendimiento, calidad y resistencia a enfermedades In: PROGRAMA NACIONAL PRODUCCIÓN DE ARROZ; JORNADA ANUAL ARROZ-SOJA, 2013, INIA TREINTA Y TRES, UY. Arroz-soja: resultados experimentales 2012-2013. Treinta y Tres: INIA, 2013. "cap. 6; p. 22-24" (INIA Serie Actividades de Difusión ; 713)| Biblioteca(s): INIA Tacuarembó; INIA Treinta y Tres. |
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| 36. | | GUTHRIE, A.D.; LEARMOUNT, J.; VANLEEUWEN, J.; PEREGRINE, A.S.; KELTON, D.; MENZIES, P.I.; FERNÁNDEZ, S.; MARTIN, R.C.; MEDEROS, A.; TAYLOR, M.A. Evaluation of a British computer model to simulate gastrointestinal nematodes in sheep on Canadian farms. Veterinary Parasitology, 2010, Volume 174, Issue 1-2, Pages 92-1052. doi: https://doi.org/10.1016/j.vetpar.2010.08.002 Article history: Received 12 January 2010; Revised 21 July 2010; Accepted 2 August 2010; Available online 11 August 2010.| Biblioteca(s): INIA Las Brujas. |
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| 37. | | ROSAS, J.E.; BONNECARRERE, V.; MARTÍNEZ, S.; PÉREZ DE VIDA, F.; BLANCO, P.H.; QUERO, G.; FERNANDEZ, S.; GARAYCOCHEA, S.; JANNINK, J.L.; GUTIÉRREZ, L. GWAS for resistance to stem rot and aggregated sheath spot in advanced temperate rice (Oryza sativa L.) germplasm. [Poster]. In: International Conference on Quantitative Genetics, (5o., 2016, Madison)| Biblioteca(s): INIA Treinta y Tres. |
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| 38. | | ROSAS, J.E.; MARTÍNEZ, S.; BONNECARRERE, V.; PÉREZ DE VIDA, F.; BLANCO, P.H.; FERNANDEZ, S.; GARAYCOCHEA, S.; JANNINK, J.L.; GUTIERREZ, L. GWAS for resistance to stem rot and aggregated sheath spot of rice advanced breeding lines. [Poster]. In: International Symposium on Rice Functional Genomics, (14o., 2016, Montpellier),| Biblioteca(s): INIA Treinta y Tres. |
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| 39. | | QUERO, G.; GUTIÉRREZ, L.; FERNANDEZ, S.; BLANCO, P.H.; PÉREZ DE VIDA, F.; GARAYCOCHEA, S.; MONTEVERDE, E.; MCCOUCH, M.; ROSAS, J.E.; BERBERIAN, N.; SIMONDIS, S.; BONNECARRERE, V. Genome wide association (GWAS) discovers rice granin quality genes in the starch metabolism, grain size and cell wall synthesis pathways. MV 24 - COMUNICACIONES LIBRES - MV. MEJORAMIENTO VEGETAL In: JOURNAL OF BASIC & APPLIED GENETICS, 2016, Vol.27, Iss. 1 (Supp.). XVI LATIN AMERICAN CONGRESS OF GENETICS, IV CONGRESS OF THE URUGUAYAN SOCIETY OF GENETICS, XLIX ANNUAL MEETING OF THE GENETICS SOCIETY OF CHILE, XLV ARGENTINE CONGRESS OF GENETICS, 9-12 October 2016. PROCEEDINGS. Montevideo (Uruguay): SAG, 2016. p. 292| Biblioteca(s): INIA Las Brujas. |
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| 40. | | ROSAS, J.E.; BONNECARRERE, V.; MARTÍNEZ, S.; PÉREZ DE VIDA, F.; BLANCO, P.H.; QUERO, G.; FERNANDEZ, S.; GARAYCOCHEA, S.; JANNINK, J.; GUTIERREZ, L. Mapeo asociativo de la resistencia a enfermedades del tallo y la vaina en germoplasma avanzado de arroz. 2 - SIMPOSIOS "MEJORAMIENTO GENÉTICO POR RESISTENCIA A ENFERMEDADES E INTERACCIONES PLANTA-PATÓGENO" In: JOURNAL OF BASIC & APPLIED GENETICS, 2016, Vol.27, Iss. 1 (Supp.). XVI LATIN AMERICAN CONGRESS OF GENETICS, IV CONGRESS OF THE URUGUAYAN SOCIETY OF GENETICS, XLIX ANNUAL MEETING OF THE GENETICS SOCIETY OF CHILE, XLV ARGENTINE CONGRESS OF GENETICS, 9-12 October 2016. PROCEEDINGS. Montevideo (Uruguay): SAG, 2016. p. 61| Biblioteca(s): INIA Las Brujas. |
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| Registros recuperados : 47 | |
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Registro completo
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Biblioteca (s) : |
INIA Las Brujas; INIA Treinta y Tres. |
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Fecha actual : |
12/03/2019 |
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Actualizado : |
12/03/2019 |
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Tipo de producción científica : |
Artículos en Revistas Indexadas Internacionales |
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Circulación / Nivel : |
Internacional - -- |
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Autor : |
QUERO, G.; GUTIÉRREZ, L.; MONTEVERDE, E.; BLANCO, P.H.; PÉREZ DE VIDA, F.; ROSAS, J.E.; FERNANDEZ, S.; GARAYCOCHEA, S.; MC COUCH, S.; BERBERIAN, N.; SIMONDI, S.; BONNECARRERE, V. |
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Afiliación : |
GASTÓN QUERO CORRALLO, Universidad de la República (UdelaR)/ Facultad de Agronomía; INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; LUCÍA GUTIÉRREZ, Dep. of Agronomy, Univ. of Wisconsin-Madison, United States.; Universidad de la República (UdelaR)/ Facultad de Agronomía; ELIANA MONTEVERDE, Dep. of Plant Breeding and Genetics, Cornell Univ., United States; PEDRO HORACIO BLANCO BARRAL, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; FERNANDO BLAS PEREZ DE VIDA, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; JUAN EDUARDO ROSAS CAISSIOLS, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; SCHUBERT DANIEL FERNANDEZ REGGIARDO, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; SILVIA RAQUEL GARAYCOCHEA SOLSONA, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; SUSAN MCCOUCH, Dep. of Plant Breeding and Genetics, Cornell Univ., United States; NATALIA BERBERIAN, Universidad de la República (UdelaR)/ Facultad de Agronomía; SEBASTIÁN SIMONDI, College of Natural and Exact Sciences, Univ. Nacional de Cuyo, Argentina; MARIA VICTORIA BONNECARRERE MARTINEZ, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay. |
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Título : |
Genome-wide association study using historical breeding populations discovers genomic regions involved in high-quality rice. |
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Fecha de publicación : |
2018 |
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Fuente / Imprenta : |
Plant Genome, 2018, Volume 11, Article number 170076. Open Access. |
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ISSN : |
1940-3372 |
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DOI : |
10.3835/plantgenome2017.08.0076 |
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Idioma : |
Inglés |
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Notas : |
Article history: Received: Aug 25, 2017 // Accepted: Apr 09, 2018 // Published: July 12, 2018.
Permissions: This is an open access article under the CC BY-NC-ND license. Proper attribution is required for reuse. No permissions are needed for reuse unless it is derivative or for commercial purposes. |
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Contenido : |
Abstract.
Rice (Oryza sativa L.) is one of the most important staple food crops in the world; however, there has recently been a shift in consumer demand for higher grain quality. Therefore, understanding the genetic architecture of grain quality has become a key objective of rice breeding programs. Genomewide association studies (GWAS) using large diversity panels have successfully identified genomic regions associated with complex traits in diverse crop species. Our main objective was to identify genomic regions associated with grain quality and to identify and characterize favorable haplotypes for selection. We used two locally adapted rice breeding populations and historical phenotypic data for three rice quality traits: yield after milling, percentage of head rice recovery, and percentage of chalky grain. We detected 22 putative quantitative trait loci (QTL) in the same genomic regions as starch synthesis, starch metabolism, and cell wall synthesis-related genes are found. Additionally, we found a genomic region on chromosome 6 in the tropical japonica population that was associated with all quality traits and we identified favorable haplotypes. Furthermorethis region is linked to the OsBEI gene that codes for a starch branching enzyme I, which is implicated in starch granule formation. In tropical japonica, we also found two putative QTL linked to OsBEII, OsDEP1, and OsDEP2. Our study provides an insight into the genetic basis of rice grain chalkiness, yield after milling, and head rice, identifying favorable haplotypes and molecular markers for selection in breeding programs.
© 2018 Crop Science Society of America MenosAbstract.
Rice (Oryza sativa L.) is one of the most important staple food crops in the world; however, there has recently been a shift in consumer demand for higher grain quality. Therefore, understanding the genetic architecture of grain quality has become a key objective of rice breeding programs. Genomewide association studies (GWAS) using large diversity panels have successfully identified genomic regions associated with complex traits in diverse crop species. Our main objective was to identify genomic regions associated with grain quality and to identify and characterize favorable haplotypes for selection. We used two locally adapted rice breeding populations and historical phenotypic data for three rice quality traits: yield after milling, percentage of head rice recovery, and percentage of chalky grain. We detected 22 putative quantitative trait loci (QTL) in the same genomic regions as starch synthesis, starch metabolism, and cell wall synthesis-related genes are found. Additionally, we found a genomic region on chromosome 6 in the tropical japonica population that was associated with all quality traits and we identified favorable haplotypes. Furthermorethis region is linked to the OsBEI gene that codes for a starch branching enzyme I, which is implicated in starch granule formation. In tropical japonica, we also found two putative QTL linked to OsBEII, OsDEP1, and OsDEP2. Our study provides an insight into the genetic basis of rice grain chalkiness, yield after mil... Presentar Todo |
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Palabras claves : |
FOOD GRAIN; GENETIC SELECTION; GENETIC VARIATION; GENETICS; MILLED RICE; PLANT BREEDING. |
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Thesagro : |
ORYZA SATIVA; RICE. |
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Asunto categoría : |
F01 Cultivo |
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URL : |
http://www.ainfo.inia.uy/digital/bitstream/item/12507/1/tpg-11-3-170076.pdf
https://dl.sciencesocieties.org/publications/tpg/abstracts/11/3/170076
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Marc : |
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100 1 $aQUERO, G.
245 $aGenome-wide association study using historical breeding populations discovers genomic regions involved in high-quality rice.$h[electronic resource]
260 $c2018
500 $aArticle history: Received: Aug 25, 2017 // Accepted: Apr 09, 2018 // Published: July 12, 2018. Permissions: This is an open access article under the CC BY-NC-ND license. Proper attribution is required for reuse. No permissions are needed for reuse unless it is derivative or for commercial purposes.
520 $aAbstract. Rice (Oryza sativa L.) is one of the most important staple food crops in the world; however, there has recently been a shift in consumer demand for higher grain quality. Therefore, understanding the genetic architecture of grain quality has become a key objective of rice breeding programs. Genomewide association studies (GWAS) using large diversity panels have successfully identified genomic regions associated with complex traits in diverse crop species. Our main objective was to identify genomic regions associated with grain quality and to identify and characterize favorable haplotypes for selection. We used two locally adapted rice breeding populations and historical phenotypic data for three rice quality traits: yield after milling, percentage of head rice recovery, and percentage of chalky grain. We detected 22 putative quantitative trait loci (QTL) in the same genomic regions as starch synthesis, starch metabolism, and cell wall synthesis-related genes are found. Additionally, we found a genomic region on chromosome 6 in the tropical japonica population that was associated with all quality traits and we identified favorable haplotypes. Furthermorethis region is linked to the OsBEI gene that codes for a starch branching enzyme I, which is implicated in starch granule formation. In tropical japonica, we also found two putative QTL linked to OsBEII, OsDEP1, and OsDEP2. Our study provides an insight into the genetic basis of rice grain chalkiness, yield after milling, and head rice, identifying favorable haplotypes and molecular markers for selection in breeding programs. © 2018 Crop Science Society of America
650 $aORYZA SATIVA
650 $aRICE
653 $aFOOD GRAIN
653 $aGENETIC SELECTION
653 $aGENETIC VARIATION
653 $aGENETICS
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773 $tPlant Genome, 2018, Volume 11, Article number 170076. Open Access.
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