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Registros recuperados : 193 | |
163. | | CASTRO, M.; JORGE, C.; LABORDA, A.; SIMÓ, M.; DIAS, M.; MIGUEL, L.; LORIER, E.; LISTRE, A.; ZERBINO, M.S. Diversidad de la araneofauna en praderas del centro-sur de Uruguay. ln: CONGRESO URUGUAYO DE ZOOLOGÍA, 1., JORNADAS DE ZOOLOGÍA DEL URUGUAY "PROF. FEDERICO ACHÁVAL", 10., 2010, Montevideo, UY. Presentaciones orales: I. Montevideo: SZU, 2010. p. 81.Biblioteca(s): INIA La Estanzuela. |
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164. | | MACHADO, M.; OLIVEIRA, L.G.S.; SCHILD, C.; BOABAID, F.; LUCAS, M.; BURONI, F.; CASTRO, M. B.; RIET-CORREA, F. Lantana camara poisoning in cattle that took refuge during a storm in a forest invaded by this plant. Toxicon, 2023, Volume 229, article 107124. https://doi.org/10.1016/j.toxicon.2023.107124 Article history: Received 8 March 2023; Received in revised form 7 April 2023; Accepted 10 April 2023; Available online 11 April 2023. -- Corresponding author: Riet-Correa, F.; Instituto Nacional de Investigación Agropecuaria, Plataforma...Biblioteca(s): INIA Las Brujas. |
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165. | | MACHADO, M.; CASTRO, M.B.; WILSON, T. M.; GONÇALVES , A. A. B.; PORTIANSKY, E.; RIET-CORREA, F.; BARROS, S. S. Poisoning by Nierembergia veitchii: Effects on vascular smooth muscle cells in the pathogenesis of enzootic calcinosis. Veterinary Pathology, 2022, Volume 59, Issue 5, pages 814-823. doi: https://doi.org/10.1177/03009858221098430 Article history: Article first published online May 19, 2022; Published online September 2022. -- Corresponding Author: Franklin Riet-Correa, Postgraduate Program in Animal Science in the Tropics, School of Veterinary Medicine and Animal...Biblioteca(s): INIA Las Brujas. |
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166. | | CASTRO, M.; PETERSON, C.J.; DALLA RIZZA, M.; DÍAZ DELLA VALLE, P.; VÁZQUEZ, D.; IBAÑEZ, W.; ROSS, A. Influence of heat stress on wheat grain characteristics and protein molecular weight distribution. ln: International Wheat Conference, 7., 27 Nov-2 Dec 2005, Mar del Plata, AR Buck, H.T.; Nisi, J.E.; Salomón, N., ed. Wheat production in stressed environments : proceedings. Dordrecht: Springer, 2007. p. 365-371. (Developments in Plant Breeding ; 12)Biblioteca(s): INIA La Estanzuela. |
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167. | | GERMAN, S.; PEREYRA, S.; CASTRO, M.; AZZIMONTI, G.; QUINCKE, M.; KOHLI, M.; MADARIAGA, R.; CHAVES , M.; CAMPO, P. Las royas del trigo: situación a nivel regional y amenazas para el cultivo. In: CONGRESO NACIONAL DE TRIGO, 8o. ; SIMPOSIO DE CEREALES DE SIEMBRA OTOÑO INVERNAL, 6o. ; ENCUENTRO DEL MERCOSUR, 2º, Pergamino, Argentina: AIANBA, 14-16 setiembre,2016.Biblioteca(s): INIA La Estanzuela. |
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170. | | CASTRO, M.; GASO, D.; VÁZQUEZ, D.; PIRELLI, J.; BERGER, A.G.; CALISTRO, R.; VERA, M.; VIEGA, L.; OTERO, A. Variabilidad genotípica en la tolerancia al anegamiento en cebada (Hordeum vulgare L.). In: CONGRESO LATINOAMERICANO DE CEBADA, 4., 2013, Bahía Blanca, AR. Resúmenes. Bahía Blanca: Bolsa de Cereales y Productos, 2013.Biblioteca(s): INIA La Estanzuela. |
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171. | | BRANDARIZ, S.P.; GONZÁELZ-REYMÚNDEZ, A.; LADO, B.; QUINCKE, M.; VON ZITZEWITZ, J.; CASTRO, M.; MATUS, I.; DEL POZO, A.; GUTIÉRREZ, L. Effect of using imputed missing data on QTL detection on a wheat GWAS panel. In: SEMINARIO INTERNACIONAL DE TRIGO, 2014, La Estanzuela, Colonia, UY. GERMÁN, S., et al. (Org.). 1914-2014, un siglo de mejoramiento de trigo en La Estanzuela: un valioso legado para el futuro: posters; resúmenes. La Estanzuela, Colonia, UY: INIA, 2014. p. 86.Biblioteca(s): INIA La Estanzuela. |
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172. | | BRANDARIZ, S.P.; GONZÁLEZ-REYMÚNDEZ, A.; LADO, B.; QUINCKE, M.; VON ZITZEWITZ, J.; CASTRO, M.; MATUS, I.; DEL POZO, A.; GUTIÉRREZ , L. Effect of using imputed missing data on QTL detection on a wheat GWAS panel. [Poster]. In: German, S.; Quincke, M.; Vázquez, D.; Castro, M.; Pereyra, S.; Silva, P.; García, A. (Eds.). Seminario Internacional "1914-2014: Un siglo de mejoramiento de trigo en La Estanzuela". Montevideo (UY): INIA, 2018. p. 304. (INIA Serie Técnica; 241).Biblioteca(s): INIA La Estanzuela. |
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173. | | SOUSA, A.L.V.; SOUSA, D.E.R.; CERQUEIRA, L.A.; QUEIROZ-MACHADO, C.R.R.; GIARETTA, P.R.; RIET-CORREA, F.; CASTRO, M.B.; MACHADO, M. Cestrum axillare hepatotoxicity in cattle in the Distrito Federal, Goiás and Minas Gerais. [Hepatotoxicidade do Cestrum axillare em bovinos do Distrito Federal, Goiás e Minas Gerais].. Original Article. Livestock Diseases. Pesquisa Veterinaria Brasileira. 2024, Volume 44, e07399. https://doi.org/10.1590/1678-5150-PVB-7399 -- OPEN ACCESS. Article history: Received 08 Nov 2023, Accepted 09 Dec 2023, Publication in this collection 18 Mar 2024, Date of issue 2024. -- Correspondence: Machado, M.; Graduate Program in Animal Science, Faculdade de Agronomia e Medicina...Biblioteca(s): INIA Las Brujas. |
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174. | | CURIN, F.; BALMACEDA, M.; BRACH, A.; CASTRO, M.; KAVANOVÁ, M.; OTERO, A.; ROSETTI, L.; RUIZ, M.; ALFARO, C.; QUINCKE, A.; ZUIL, S.; GONZÁLEZ, F.G. Evaluación de cultivares de trigo contrastantes para tolerancia a deficit hídrico en un amplio rango de ambientes en el cono sur de America. In: IX Congreso Nacional de Calidad de Trigo, 9°; VII Simposio de Cereales de siembra otoño-invernal; III Reunión del Mercosur, 29-30 setiembre 2021, tres arroyos, Provincia de Buenos Aires, Argentina: La Chacra Experimental Integrada Barrow, Instituto Nacional de Tecnología Agropecuaria (INTA), Centro Regional de Ingenieros Agrónomos de Tres Arroyos (CRIATA), Centro Regional de Estudios Superiores de Tres Arroyos (CRESTA).Modalidad Virtual.Biblioteca(s): INIA La Estanzuela. |
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175. | | ALZUGARAY, R.; BAO, L.; CASCO, M.; CASTRO, M.; CUITIÑO, M.J.; GONZÁLEZ, S.N.; PLA, M.; REBUFFO, M.; RIBEIRO, A.; ZARZA, R. Estrategias recomendadas para mejorar la implantación de leguminosas forrajeras. In:REUNIÓN TÉCNICA (2013, LA ESTANZUELA, COLONIA, UY): el éxito productivo de una pastura con leguminosas perennes comienza en su implantación.La Estanzuela, Colonia: INIA, 2013. p. 43-44. (Serie Actividades de Difusión ; 711).Biblioteca(s): INIA La Estanzuela. |
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176. | | MACÊDO, I.L. DE; SOUSA, D.E.R. DE; SOUZA, A.D.R.; ARMIÉN, A.G.; MACHADO, M.; CASTRO, M.B. DE Fatal Africanized bee attack in captive non-human primates (Saimiri ustus and Sapajus libidinosus). Short communication. Toxicon. 2024, Volume 241, Article 107666. https://doi.org/10.1016/j.toxicon.2024.107666 Article history: Received 8 February 2024, Revised 26 February 2024, Accepted 27 February 2024, Available online 28 February 2024, Version of Record 8 March 2024. -- Correspondence: Castro, M.B.D.; Veterinary Pathology and Forensic...Biblioteca(s): INIA Las Brujas. |
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177. | | LADO, B.; POLAND, J.; BELZILE, F.; DEL POZO, A.; MATUS, I.; RODRÍGUEZ, A.; INOSTROZA, L.; LOBOS, G.A.; CASTRO, M.; QUINCKE, M.; LANDECHEA, L.; VON ZITZEWITZ, J. Genotipado por secuenciación del genoma de 384 genotipos de T. aestivum para selección genómica. BAG. Journal of Basic and Applied Genetics ,Ciudad Autónoma de Buenos Aires, v.23, supl.1, p. 267, 2012.Biblioteca(s): INIA La Estanzuela. |
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178. | | MACHADO, M.; QUEIROZ-MACHADO, C.R.R.; GARDNER, D.R.; CASTRO, M.B.; CÂMARA, A.C.L.; PIMENTEL, L.A.; GALIZA, G.J.N.; RIET-CORREA, F. Leucaena leucocephala toxicity in Brazilian horses. Toxicon. 2024, Volume 240, Article 107655. https://doi.org/10.1016/j.toxicon.2024.107655 Article history: Received 10 January 2024; Received in revised form 16 February 2024; Accepted 18 February 2024; Available online 19 February 2024. -- Correspondence: Machado, M.; Plataforma de Investigación en Salud Animal (PSA),...Biblioteca(s): INIA Las Brujas. |
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179. | | MACHADO, M.; QUEIROZ, CINTIA R.R.; WILSON, T. M.; SOUSA, D.E.R.; SOTO-BLANCO, B.; ARMIÉN, A.G.; BARROS, S.S.; RIET-CORREA, F.; CASTRO, M.B. Neurological and gastrointestinal manifestations of spontaneous poisoning by Ricinus communis in goats. Toxicon, July 2022, vol. 214, pages 74-77. doi: https://doi.org/10.1016/j.toxicon.2022.05.004 Article history: Received 20 April 2022; Received in revised form 4 May 2022; Accepted 13 May 2022; Available online 20 May 2022.
Corresponding author: Machado, M.; Instituto Nacional de Investigación Agropecuaria, Plataforma de Salud...Biblioteca(s): INIA Las Brujas. |
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180. | | LADO, B.; MATUS, I.; RODRIGUEZ, A.; INOSTROZA, L.; POLAND, J.; BELZILE ,F.; DEL POZO, A.; QUINCKE, M.; CASTRO, M.; VON ZITZEWITZ, J. Increased genomic prediction accuracy in wheat breeding through spatial adjustment of field trial data. G3: Genes, Genomes, Genetics (Bethesda), v. 3, n,12, p. 2105-2114, 2013.OPEN ACCESS. Article history: Received 2013 Aug 26 // Accepted 2013 Sep 18.Biblioteca(s): INIA La Estanzuela. |
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Registros recuperados : 193 | |
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Registro completo
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Biblioteca (s) : |
INIA La Estanzuela. |
Fecha actual : |
26/09/2014 |
Actualizado : |
06/11/2019 |
Tipo de producción científica : |
Artículos en Revistas Indexadas Internacionales |
Circulación / Nivel : |
B - 5 |
Autor : |
LADO, B.; MATUS, I.; RODRIGUEZ, A.; INOSTROZA, L.; POLAND, J.; BELZILE ,F.; DEL POZO, A.; QUINCKE, M.; CASTRO, M.; VON ZITZEWITZ, J. |
Afiliación : |
BETTINA LADO LINDNER, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; MARTIN CONRADO QUINCKE WALDEN, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; MARINA CASTRO DERENYI, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; JARISLAV RAMON VON ZITZEWITZ VON SALVIATI, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay. |
Título : |
Increased genomic prediction accuracy in wheat breeding through spatial adjustment of field trial data. |
Fecha de publicación : |
2013 |
Fuente / Imprenta : |
G3: Genes, Genomes, Genetics (Bethesda), v. 3, n,12, p. 2105-2114, 2013.OPEN ACCESS. |
ISSN : |
2160-1836. |
DOI : |
10.1534/g3.113.007807 |
Idioma : |
Inglés |
Notas : |
Article history: Received 2013 Aug 26 // Accepted 2013 Sep 18. |
Contenido : |
Abstract:
In crop breeding, the interest of predicting the performance of candidate cultivars in the field has increased due to recent advances in molecular breeding technologies. However, the complexity of the wheat genome presents some challenges for applying new technologies in molecular marker identification with next-generation sequencing. We applied genotyping-by-sequencing, a recently developed method to identify single-nucleotide polymorphisms, in the genomes of 384 wheat (Triticum aestivum) genotypes that were field tested under three different water regimes in Mediterranean climatic conditions: rain-fed only, mild water stress, and fully irrigated. We identified 102,324 single-nucleotide polymorphisms in these genotypes, and the phenotypic data were used to train and test genomic selection models intended to predict yield, thousand-kernel weight, number of kernels per spike, and heading date. Phenotypic data showed marked spatial variation. Therefore, different models were tested to correct the trends observed in the field. A mixed-model using moving-means as a covariate was found to best fit the data. When we applied the genomic selection models, the accuracy of predicted traits increased with spatial adjustment. Multiple genomic selection models were tested, and a Gaussian kernel model was determined to give the highest accuracy. The best predictions between environments were obtained when data from different years were used to train the model. Our results confirm that genotyping-by-sequencing is an effective tool to obtain genome-wide information for crops with complex genomes, that these data are efficient for predicting traits, and that correction of spatial variation is a crucial ingredient to increase prediction accuracy in genomic selection models. MenosAbstract:
In crop breeding, the interest of predicting the performance of candidate cultivars in the field has increased due to recent advances in molecular breeding technologies. However, the complexity of the wheat genome presents some challenges for applying new technologies in molecular marker identification with next-generation sequencing. We applied genotyping-by-sequencing, a recently developed method to identify single-nucleotide polymorphisms, in the genomes of 384 wheat (Triticum aestivum) genotypes that were field tested under three different water regimes in Mediterranean climatic conditions: rain-fed only, mild water stress, and fully irrigated. We identified 102,324 single-nucleotide polymorphisms in these genotypes, and the phenotypic data were used to train and test genomic selection models intended to predict yield, thousand-kernel weight, number of kernels per spike, and heading date. Phenotypic data showed marked spatial variation. Therefore, different models were tested to correct the trends observed in the field. A mixed-model using moving-means as a covariate was found to best fit the data. When we applied the genomic selection models, the accuracy of predicted traits increased with spatial adjustment. Multiple genomic selection models were tested, and a Gaussian kernel model was determined to give the highest accuracy. The best predictions between environments were obtained when data from different years were used to train the model. Our results confir... Presentar Todo |
Palabras claves : |
GBLUP; GENOMIC SELECTION; GENOTIPADO POR SECUENCIACIÓN; GENOTYPING BY SEQUENCING; GENPRED; LOCUS DE UN CARÁCTER CUANTITATIVO; MEJOR PREDICTOR LINEAR INSESGADO; POLIMORFISMO DE NUCLEÓTICO SIMPLE; QTL; QUANTITATIVE TRAIT LOCUS; SELECCIÓN GENÓMICA; SHARED DATA RESOURCES; SINGLE NUCLEOTIDE POLYMORPHISM; SPATIAL CORRECTION; WHEAT. |
Thesagro : |
TRIGO; TRITICUM AESTIVUM. |
Asunto categoría : |
F30 Genética vegetal y fitomejoramiento |
URL : |
http://www.ainfo.inia.uy/digital/bitstream/item/13756/1/G3Bethesda-v.-3-n12-p.-2105-2114-2013.pdf
|
Marc : |
LEADER 03249naa a2200469 a 4500 001 1050586 005 2019-11-06 008 2013 bl uuuu u00u1 u #d 022 $a2160-1836. 024 7 $a10.1534/g3.113.007807$2DOI 100 1 $aLADO, B. 245 $aIncreased genomic prediction accuracy in wheat breeding through spatial adjustment of field trial data.$h[electronic resource] 260 $c2013 500 $aArticle history: Received 2013 Aug 26 // Accepted 2013 Sep 18. 520 $aAbstract: In crop breeding, the interest of predicting the performance of candidate cultivars in the field has increased due to recent advances in molecular breeding technologies. However, the complexity of the wheat genome presents some challenges for applying new technologies in molecular marker identification with next-generation sequencing. We applied genotyping-by-sequencing, a recently developed method to identify single-nucleotide polymorphisms, in the genomes of 384 wheat (Triticum aestivum) genotypes that were field tested under three different water regimes in Mediterranean climatic conditions: rain-fed only, mild water stress, and fully irrigated. We identified 102,324 single-nucleotide polymorphisms in these genotypes, and the phenotypic data were used to train and test genomic selection models intended to predict yield, thousand-kernel weight, number of kernels per spike, and heading date. Phenotypic data showed marked spatial variation. Therefore, different models were tested to correct the trends observed in the field. A mixed-model using moving-means as a covariate was found to best fit the data. When we applied the genomic selection models, the accuracy of predicted traits increased with spatial adjustment. Multiple genomic selection models were tested, and a Gaussian kernel model was determined to give the highest accuracy. The best predictions between environments were obtained when data from different years were used to train the model. Our results confirm that genotyping-by-sequencing is an effective tool to obtain genome-wide information for crops with complex genomes, that these data are efficient for predicting traits, and that correction of spatial variation is a crucial ingredient to increase prediction accuracy in genomic selection models. 650 $aTRIGO 650 $aTRITICUM AESTIVUM 653 $aGBLUP 653 $aGENOMIC SELECTION 653 $aGENOTIPADO POR SECUENCIACIÓN 653 $aGENOTYPING BY SEQUENCING 653 $aGENPRED 653 $aLOCUS DE UN CARÁCTER CUANTITATIVO 653 $aMEJOR PREDICTOR LINEAR INSESGADO 653 $aPOLIMORFISMO DE NUCLEÓTICO SIMPLE 653 $aQTL 653 $aQUANTITATIVE TRAIT LOCUS 653 $aSELECCIÓN GENÓMICA 653 $aSHARED DATA RESOURCES 653 $aSINGLE NUCLEOTIDE POLYMORPHISM 653 $aSPATIAL CORRECTION 653 $aWHEAT 700 1 $aMATUS, I. 700 1 $aRODRIGUEZ, A. 700 1 $aINOSTROZA, L. 700 1 $aPOLAND, J. 700 1 $aBELZILE ,F. 700 1 $aDEL POZO, A. 700 1 $aQUINCKE, M. 700 1 $aCASTRO, M. 700 1 $aVON ZITZEWITZ, J. 773 $tG3: Genes, Genomes, Genetics (Bethesda)$gv. 3, n,12, p. 2105-2114, 2013.OPEN ACCESS.
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