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Registro completo
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Biblioteca (s) : |
INIA Las Brujas. |
Fecha : |
31/07/2017 |
Actualizado : |
13/12/2022 |
Tipo de producción científica : |
Artículos en Revistas Indexadas Internacionales |
Autor : |
MOTTA, R. R.; SILVA, F. F.; LOPES, P. S.; TEMPELMAN, R. J.; SOLLERO, B. P.; AGUILAR, I.; CARDOSO, F. F. |
Afiliación : |
R. R. MOTTA, Gembloux Agro-Bio Tech Faculty, TERRA Teaching and Research Centre, University of Liège, Gembloux, Belgium; F. F. SILVA, Department of Animal Science, Universidade Federal de Viçosa, Minas Gerais, Brazil; P. S. LOPES, Department of Animal Science, Universidade Federal de Viçosa, Minas Gerais, Brazil; R. J. TEMPELMAN, Department of Animal Science, Michigan State University, MI, USA; B. P. SOLLERO, Embrapa Pecuária Sul, Rio Grande do Sul, Brazil; IGNACIO AGUILAR GARCIA, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; F. F. CARDOSO, Embrapa Pecuária Sul, Rio Grande do Sul, Brazil; 6 Programa de Pós-graduação em Zootecnia, Universidade Federal de Pelotas, Rio Grande do Sul, Brazil. |
Título : |
Analyses of reaction norms reveal new chromosome regions associated with tick resistance in cattle. |
Fecha de publicación : |
2018 |
Fuente / Imprenta : |
Animal, 2018, volume 12, Issue 2, pages 205-214. OPEN ACCESS. doi: https://doi.org/10.1017/S1751731117001562 |
DOI : |
10.1017/S1751731117001562 |
Idioma : |
Inglés |
Notas : |
Article history: Received 12 December 2016; Accepted 22 May 2017; Published online: 13 July 2017.
Corresponding author: R.R. Mota, Gembloux Agro-Bio Tech Faculty, TERRA Teaching and Research Centre, University of Liège, B-5030 Gembloux, Belgium,
rrmota@ulg.ac.be -- License Under a Creative Commons. |
Contenido : |
ABSTRACT.- Despite single nucleotide polymorphism (SNP) availability and frequent cost reduction has allowed genome-wide association studies even in complex traits as tick resistance, the use of this information source in SNP by environment interaction context is unknown for many economically important traits in cattle. We aimed at identifying putative genomic regions explaining differences in tick resistance in Hereford and Braford cattle under SNP by environment point of view as well as to identify candidate genes derived from outliers/significant markers. The environment was defined as contemporary group means of tick counts, since they seemed to be the most appropriate entities to describe the environmental gradient in beef cattle. A total of 4363 animals having tick counts (n=10 673) originated from 197 sires and 3966 dams were used. Genotypes were acquired on 3591 of these cattle. From top 1% SNPs (410) having the greatest effects in each environment, 75 were consistently relevant in all environments, which indicated SNP by environment interaction. The outliers/significant SNPs were mapped on chromosomes 1, 2, 5, 6, 7, 9, 11, 13, 14, 15, 16, 18, 21, 23, 24, 26 and 28, and potential candidate genes were detected across environments. The presence of SNP by environment interaction for tick resistance indicates that genetic expression of resistance depends upon tick burden. Markers with major portion of genetic variance explained across environments appeared to be close to genes with different direct or indirect functions related to immune system, inflammatory process and mechanisms of tissue destruction/repair, such as energy metabolism and cell differentiation. © The Animal Consortium 2017 MenosABSTRACT.- Despite single nucleotide polymorphism (SNP) availability and frequent cost reduction has allowed genome-wide association studies even in complex traits as tick resistance, the use of this information source in SNP by environment interaction context is unknown for many economically important traits in cattle. We aimed at identifying putative genomic regions explaining differences in tick resistance in Hereford and Braford cattle under SNP by environment point of view as well as to identify candidate genes derived from outliers/significant markers. The environment was defined as contemporary group means of tick counts, since they seemed to be the most appropriate entities to describe the environmental gradient in beef cattle. A total of 4363 animals having tick counts (n=10 673) originated from 197 sires and 3966 dams were used. Genotypes were acquired on 3591 of these cattle. From top 1% SNPs (410) having the greatest effects in each environment, 75 were consistently relevant in all environments, which indicated SNP by environment interaction. The outliers/significant SNPs were mapped on chromosomes 1, 2, 5, 6, 7, 9, 11, 13, 14, 15, 16, 18, 21, 23, 24, 26 and 28, and potential candidate genes were detected across environments. The presence of SNP by environment interaction for tick resistance indicates that genetic expression of resistance depends upon tick burden. Markers with major portion of genetic variance explained across environments appeared to be close to... Presentar Todo |
Palabras claves : |
BEEF CATTLE; CANDIDATE GENES; ENVIRONMENT GRADIENT; GENE FUNCTION; SINGLE-STEP. |
Asunto categoría : |
-- |
URL : |
http://www.ainfo.inia.uy/digital/bitstream/item/16916/1/10.1017-S1751731117001562.pdf
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Marc : |
LEADER 02878naa a2200277 a 4500 001 1057417 005 2022-12-13 008 2018 bl uuuu u00u1 u #d 024 7 $a10.1017/S1751731117001562$2DOI 100 1 $aMOTTA, R. R. 245 $aAnalyses of reaction norms reveal new chromosome regions associated with tick resistance in cattle.$h[electronic resource] 260 $c2018 500 $aArticle history: Received 12 December 2016; Accepted 22 May 2017; Published online: 13 July 2017. Corresponding author: R.R. Mota, Gembloux Agro-Bio Tech Faculty, TERRA Teaching and Research Centre, University of Liège, B-5030 Gembloux, Belgium, rrmota@ulg.ac.be -- License Under a Creative Commons. 520 $aABSTRACT.- Despite single nucleotide polymorphism (SNP) availability and frequent cost reduction has allowed genome-wide association studies even in complex traits as tick resistance, the use of this information source in SNP by environment interaction context is unknown for many economically important traits in cattle. We aimed at identifying putative genomic regions explaining differences in tick resistance in Hereford and Braford cattle under SNP by environment point of view as well as to identify candidate genes derived from outliers/significant markers. The environment was defined as contemporary group means of tick counts, since they seemed to be the most appropriate entities to describe the environmental gradient in beef cattle. A total of 4363 animals having tick counts (n=10 673) originated from 197 sires and 3966 dams were used. Genotypes were acquired on 3591 of these cattle. From top 1% SNPs (410) having the greatest effects in each environment, 75 were consistently relevant in all environments, which indicated SNP by environment interaction. The outliers/significant SNPs were mapped on chromosomes 1, 2, 5, 6, 7, 9, 11, 13, 14, 15, 16, 18, 21, 23, 24, 26 and 28, and potential candidate genes were detected across environments. The presence of SNP by environment interaction for tick resistance indicates that genetic expression of resistance depends upon tick burden. Markers with major portion of genetic variance explained across environments appeared to be close to genes with different direct or indirect functions related to immune system, inflammatory process and mechanisms of tissue destruction/repair, such as energy metabolism and cell differentiation. © The Animal Consortium 2017 653 $aBEEF CATTLE 653 $aCANDIDATE GENES 653 $aENVIRONMENT GRADIENT 653 $aGENE FUNCTION 653 $aSINGLE-STEP 700 1 $aSILVA, F. F. 700 1 $aLOPES, P. S. 700 1 $aTEMPELMAN, R. J. 700 1 $aSOLLERO, B. P. 700 1 $aAGUILAR, I. 700 1 $aCARDOSO, F. F. 773 $tAnimal, 2018, volume 12, Issue 2, pages 205-214. OPEN ACCESS. doi: https://doi.org/10.1017/S1751731117001562
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Registros recuperados : 13 | |
2. | | BENTANCOR, L.; RUIZ, A.; CASTAÑO, V.; DURÁN, P. Medición de agua y transmisión de datos en sistemas de riego por gravedad. ln: JORNADA ANUAL ARROZ, 2016, INIA TREINTA Y TRES, TREINTA Y TRES, UY. Arroz: resultados experimentales 2015-2016. Treinta y Tres, (Uruguay): INIA, 2016. cap. 2, p. 23-25. (INIA Serie Actividades de Difusión; 765)Biblioteca(s): INIA Tacuarembó; INIA Treinta y Tres. |
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5. | | BENTANCOR, L.; HERNÁNDEZ, J.; DEL PINO, A.; CALIFRA, A.; RESQUÍN, F.; GONZÁLEZ-BARRIOS, P. Evaluation of the biomass production, energy yield and nutrient removal of Eucalyptus dunnii Maiden grown in short rotation coppice under two initial planting densities and harvest systems. Biomass and Bioenergy, 2019, v. 122, p. 165-174. Article history: Received 31 August 2018 // Received in revised form 18 January 2019 // Accepted 21 January 2019.Tipo: Artículos en Revistas Indexadas Internacionales | Circulación / Nivel : Internacional - -- |
Biblioteca(s): INIA Tacuarembó. |
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7. | | BENTANCOR, L.; HERNÁNDEZ, J.; DEL PINO, A.; CALIFRA, A.; GONZÁLEZ, P.; RESQUÍN, F. Nutrient removal with harvest of biomass of Eucalyptus dunnii maiden grown in short rotation coppice for bioenergy. In: UNIVERSIDAD DE LA REPÚBLICA (UDELAR). FACULTAD DE AGRONOMÍA. Resúmenes. Jornadas de Investigación, 8-9 nov., 2018, Montevideo, Uruguay. Montevideo: FAGRO, 2019. p. 71 Trabajo originalmente publicado en: Hernández J., Bentancor L., del Pino A., Califra A., González P. & Resquin F. 2018. 21st World Soil Science Congress (Presenta trabajo, 12/08/2018). Nutrient extraction by the biomass of Eucalypts...Tipo: Abstracts/Resúmenes |
Biblioteca(s): INIA Tacuarembó. |
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8. | | GIMÉNEZ, L.; PUPPO, L.; BENTANCOR, L.; HAYASHI, R.; SAWCHIK, J.; GARCIA, C. (Ed.). Riego en cultivos y pasturas. 3er. Seminario Internacional, 2014, Paysandú (Uruguay). Montevideo : INIA, 2014. 137 p. Instituciones: Grupo de Desarrollo de Riego (GDR), Facultad de Agronomía (FAGRO); Instituto Nacional de Investigación Agropecuaria (INIA). - Edición a cargo de: Luis Giménez, Lucía Puppo, Lisette Bentancor, Raquel Hayashi, Jorge Sawchik,...Biblioteca(s): INIA La Estanzuela; INIA Las Brujas; INIA Tacuarembó; INIA Treinta y Tres. |
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9. | | RESQUÍN, F.; BENTANCOR, L.; CARRASCO-LETELIER, L.; RACHID, C.; NAVARRO-CERRILLO, R.M. Rotation length of intensive Eucalyptus plantations: how it impacts on productive and energy sustainability. Biomass and Bioenergy, 2022, Volume 166, article 106607. doi: https://doi.org/10.1016/j.biombioe.2022.106607 Article history: Received 11 April 2022; Received in revised form 31 August 2022; Accepted 18 September 2022; To be published November 2022.
Corresponding author: Fernando Resquin, Route 5 km 368, CP45000, INIA Tacuarembó, Uruguay. E-mail...Tipo: Artículos en Revistas Indexadas Internacionales | Circulación / Nivel : Internacional - -- |
Biblioteca(s): INIA Las Brujas. |
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10. | | MÁRMOL, S.; BENTANCOR, L.; FRANCIA, M.; HIRIGOYEN, A.; PÉREZ BIDEGAIN, M.; BLANCO, G.; PÉREZ, M.M. Verification of deep root exploration of Eucalyptus grandis to permian sedimentary rocks of northeastern Uruguay. [Verificación de exploración radicular profunda de Eucalyptus grandishasta rocas sedimentarias pérmicas del noreste uruguayo]. [Verificação da exploração de raízes profundas de Eucalyptus grandisaté rochas sedimentares Permianas do nordeste do Uruguai]. Agrociencia Uruguay, 2022, vol. 26, NE1, e508. https://doi.org/10.31285/AGRO.26.508 Article history: Received 19 Jan 2021, Accepted 13 Nov 2021, Published 27 May 2022.
Special issue in homage to Prof. Jorge Bossi (1934-2020). [Número especial en homenaje al Prof. Jorge Bossi].
Editores: Antonella Celio, Universidad de la...Tipo: Artículos en Revistas Indexadas Nacionales | Circulación / Nivel : Nacional - -- |
Biblioteca(s): INIA Las Brujas. |
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11. | | CASTILLO, A.; ASHFIELD, R.; BENTANCOR, M.; BENTANCOR, L.; BONILLA, B.; CEPPA, M.; FRANCO, R.; SILVA, N.; CABRERA, D.; RODRIGUEZ, P.; ZOPPOLO, R. Micropropagación de plantas en biorreactores de inmersión temporal (BIT). Revista INIA Uruguay, 2019, no. 56, p. 88-91. (Revista INIA; 56)Tipo: Artículos en Revistas Agropecuarias |
Biblioteca(s): INIA Treinta y Tres. |
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12. | | DELPIAZZO, R.; BARCELLOS, M.; BARROS, S.; BENTANCOR, L.; FRAGA, M.; GIL, J.; IRAOLA, G.; MORSELLA, C.; PAOLICCHI, F.; PÉREZ, R.; RIET-CORREA, F.; SANGUINETTI, M.; SILVA, A.; SILVEIRA, C.S.; CALLEROS, L. Accurate and fast identification of Campylobacter fetus in bulls by real-time PCR targeting a 16S rRNA gene sequence. Veterinary and Animal Science, January 2021, vol.11 no. 100165, 5 p. OPEN ACCESS. Doi: https://doi.org/10.1016/j.vas.2020.100163 Article history: Received 21 October 2020 / Received in revised form 20 December 2020 / Accepted 22 December 2020 / available online 24 December 2020.
Corresponding author: laurabet@higiene.edu.uyTipo: Artículos en Revistas Indexadas Internacionales | Circulación / Nivel : Internacional - -- |
Biblioteca(s): INIA Treinta y Tres. |
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13. | | SILVEIRA, L.; CHRETIES, CH.; ALONSO, J.; AMORÍN, C.; DE IZAGUIRRE, P.; CRISCI, M.; SYMONDS, S.; MARTÍNEZ, L.; GARCÍA, M.; GARCÍA, F.; DELGADO, S.; CLÉRICI, C.; BENTANCOR, L.; HILL, M.; ALLIAUME, F.; CABRAL, P.; AUDICIO, P.; IROUMÉ, A.; HUBER, A.; SCHIPILOV, A. Efectos de la actividad forestal sobre los recursos suelos y aguas Montevideo (UY): INIA, 2011. 41 p. (Serie FPTA-INIA; 32) "Proyecto FPTA 210: "Efecto de la actividad forestal sobre los recursos suelos y aguas, en microcuencas similares sometidas a distinto manejo". Período de Ejecución: Mar. 2007-Jun. 2010Biblioteca(s): INIA Las Brujas; INIA Tacuarembó. |
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Registros recuperados : 13 | |
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