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Registro completo
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Biblioteca (s) : |
INIA Las Brujas. |
Fecha : |
31/07/2017 |
Actualizado : |
13/12/2022 |
Tipo de producción científica : |
Artículos en Revistas Indexadas Internacionales |
Autor : |
MOTTA, R. R.; SILVA, F. F.; LOPES, P. S.; TEMPELMAN, R. J.; SOLLERO, B. P.; AGUILAR, I.; CARDOSO, F. F. |
Afiliación : |
R. R. MOTTA, Gembloux Agro-Bio Tech Faculty, TERRA Teaching and Research Centre, University of Liège, Gembloux, Belgium; F. F. SILVA, Department of Animal Science, Universidade Federal de Viçosa, Minas Gerais, Brazil; P. S. LOPES, Department of Animal Science, Universidade Federal de Viçosa, Minas Gerais, Brazil; R. J. TEMPELMAN, Department of Animal Science, Michigan State University, MI, USA; B. P. SOLLERO, Embrapa Pecuária Sul, Rio Grande do Sul, Brazil; IGNACIO AGUILAR GARCIA, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; F. F. CARDOSO, Embrapa Pecuária Sul, Rio Grande do Sul, Brazil; 6 Programa de Pós-graduação em Zootecnia, Universidade Federal de Pelotas, Rio Grande do Sul, Brazil. |
Título : |
Analyses of reaction norms reveal new chromosome regions associated with tick resistance in cattle. |
Fecha de publicación : |
2018 |
Fuente / Imprenta : |
Animal, 2018, volume 12, Issue 2, pages 205-214. OPEN ACCESS. doi: https://doi.org/10.1017/S1751731117001562 |
DOI : |
10.1017/S1751731117001562 |
Idioma : |
Inglés |
Notas : |
Article history: Received 12 December 2016; Accepted 22 May 2017; Published online: 13 July 2017.
Corresponding author: R.R. Mota, Gembloux Agro-Bio Tech Faculty, TERRA Teaching and Research Centre, University of Liège, B-5030 Gembloux, Belgium,
rrmota@ulg.ac.be -- License Under a Creative Commons. |
Contenido : |
ABSTRACT.- Despite single nucleotide polymorphism (SNP) availability and frequent cost reduction has allowed genome-wide association studies even in complex traits as tick resistance, the use of this information source in SNP by environment interaction context is unknown for many economically important traits in cattle. We aimed at identifying putative genomic regions explaining differences in tick resistance in Hereford and Braford cattle under SNP by environment point of view as well as to identify candidate genes derived from outliers/significant markers. The environment was defined as contemporary group means of tick counts, since they seemed to be the most appropriate entities to describe the environmental gradient in beef cattle. A total of 4363 animals having tick counts (n=10 673) originated from 197 sires and 3966 dams were used. Genotypes were acquired on 3591 of these cattle. From top 1% SNPs (410) having the greatest effects in each environment, 75 were consistently relevant in all environments, which indicated SNP by environment interaction. The outliers/significant SNPs were mapped on chromosomes 1, 2, 5, 6, 7, 9, 11, 13, 14, 15, 16, 18, 21, 23, 24, 26 and 28, and potential candidate genes were detected across environments. The presence of SNP by environment interaction for tick resistance indicates that genetic expression of resistance depends upon tick burden. Markers with major portion of genetic variance explained across environments appeared to be close to genes with different direct or indirect functions related to immune system, inflammatory process and mechanisms of tissue destruction/repair, such as energy metabolism and cell differentiation. © The Animal Consortium 2017 MenosABSTRACT.- Despite single nucleotide polymorphism (SNP) availability and frequent cost reduction has allowed genome-wide association studies even in complex traits as tick resistance, the use of this information source in SNP by environment interaction context is unknown for many economically important traits in cattle. We aimed at identifying putative genomic regions explaining differences in tick resistance in Hereford and Braford cattle under SNP by environment point of view as well as to identify candidate genes derived from outliers/significant markers. The environment was defined as contemporary group means of tick counts, since they seemed to be the most appropriate entities to describe the environmental gradient in beef cattle. A total of 4363 animals having tick counts (n=10 673) originated from 197 sires and 3966 dams were used. Genotypes were acquired on 3591 of these cattle. From top 1% SNPs (410) having the greatest effects in each environment, 75 were consistently relevant in all environments, which indicated SNP by environment interaction. The outliers/significant SNPs were mapped on chromosomes 1, 2, 5, 6, 7, 9, 11, 13, 14, 15, 16, 18, 21, 23, 24, 26 and 28, and potential candidate genes were detected across environments. The presence of SNP by environment interaction for tick resistance indicates that genetic expression of resistance depends upon tick burden. Markers with major portion of genetic variance explained across environments appeared to be close to... Presentar Todo |
Palabras claves : |
BEEF CATTLE; CANDIDATE GENES; ENVIRONMENT GRADIENT; GENE FUNCTION; SINGLE-STEP. |
Asunto categoría : |
-- |
URL : |
http://www.ainfo.inia.uy/digital/bitstream/item/16916/1/10.1017-S1751731117001562.pdf
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Marc : |
LEADER 02878naa a2200277 a 4500 001 1057417 005 2022-12-13 008 2018 bl uuuu u00u1 u #d 024 7 $a10.1017/S1751731117001562$2DOI 100 1 $aMOTTA, R. R. 245 $aAnalyses of reaction norms reveal new chromosome regions associated with tick resistance in cattle.$h[electronic resource] 260 $c2018 500 $aArticle history: Received 12 December 2016; Accepted 22 May 2017; Published online: 13 July 2017. Corresponding author: R.R. Mota, Gembloux Agro-Bio Tech Faculty, TERRA Teaching and Research Centre, University of Liège, B-5030 Gembloux, Belgium, rrmota@ulg.ac.be -- License Under a Creative Commons. 520 $aABSTRACT.- Despite single nucleotide polymorphism (SNP) availability and frequent cost reduction has allowed genome-wide association studies even in complex traits as tick resistance, the use of this information source in SNP by environment interaction context is unknown for many economically important traits in cattle. We aimed at identifying putative genomic regions explaining differences in tick resistance in Hereford and Braford cattle under SNP by environment point of view as well as to identify candidate genes derived from outliers/significant markers. The environment was defined as contemporary group means of tick counts, since they seemed to be the most appropriate entities to describe the environmental gradient in beef cattle. A total of 4363 animals having tick counts (n=10 673) originated from 197 sires and 3966 dams were used. Genotypes were acquired on 3591 of these cattle. From top 1% SNPs (410) having the greatest effects in each environment, 75 were consistently relevant in all environments, which indicated SNP by environment interaction. The outliers/significant SNPs were mapped on chromosomes 1, 2, 5, 6, 7, 9, 11, 13, 14, 15, 16, 18, 21, 23, 24, 26 and 28, and potential candidate genes were detected across environments. The presence of SNP by environment interaction for tick resistance indicates that genetic expression of resistance depends upon tick burden. Markers with major portion of genetic variance explained across environments appeared to be close to genes with different direct or indirect functions related to immune system, inflammatory process and mechanisms of tissue destruction/repair, such as energy metabolism and cell differentiation. © The Animal Consortium 2017 653 $aBEEF CATTLE 653 $aCANDIDATE GENES 653 $aENVIRONMENT GRADIENT 653 $aGENE FUNCTION 653 $aSINGLE-STEP 700 1 $aSILVA, F. F. 700 1 $aLOPES, P. S. 700 1 $aTEMPELMAN, R. J. 700 1 $aSOLLERO, B. P. 700 1 $aAGUILAR, I. 700 1 $aCARDOSO, F. F. 773 $tAnimal, 2018, volume 12, Issue 2, pages 205-214. OPEN ACCESS. doi: https://doi.org/10.1017/S1751731117001562
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41. | | DALLA RIZZA, M.; DIAZ, P.; NARANCIO, R.; CABRERA, A.; FERREIRA, F. Biomolecules as host defense weapons against microbial pathogens. (Review) Recent Patents on DNA and Gene Sequences, 2008, v.2, no.2, p.82-96. Article history: Received: April 21, 2008 / Accepted: April 29, 2008 / Revised: April 29, 2008.Tipo: Artículos en Revistas Indexadas Internacionales | Circulación / Nivel : Internacional - - |
Biblioteca(s): INIA Las Brujas. |
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44. | | NAVAJAS, E.; RAVAGNOLO, O.; AGUILAR, I.; CIAPPESONI, G.; PERAZA, P.; DALLA RIZZA, M.; MONTOSSI, F. Desarrollo de una plataforma en selección genómica enfocada en el progreso genético animal. ln: Jornada técnica, VI Jornada de agrobiotecnología. INIA Las Brujas, 20 de octubre de 2012 Conocimiento intensivo para el sector productivo: situación actual y perspectivas. Canelones (UY): INIA, 2012. 10-12 (Serie Actividades de Difusión; 698)Tipo: Actividades de Difusión |
Biblioteca(s): INIA Las Brujas. |
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46. | | OBERTI, H.; DALLA RIZZA, M.; REYNO, R.; MURCHIO, S.; ALTIER, N.; ABREO, E. Diversity of Claviceps paspali reveals unknown lineages and unique alkaloid genotypes. Mycologia, 3 March 2020, Volume 112, Issue 2, Pages 230-243. Doi: https://doi.org/10.1080/00275514.2019.1694827 Article history: Received 25 Apr 2019 // Accepted 15 Nov 2019 // Published online: 07 Jan 2020. CONTACT: E. Abreo, eabreo@inia.org.uy. FUNDING: This work was supported by the National Institute of Agricultural Research (INIA) of Uruguay...Tipo: Artículos en Revistas Indexadas Internacionales | Circulación / Nivel : Internacional - -- |
Biblioteca(s): INIA Tacuarembó. |
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47. | | ESQUIVEL, F.; BENTANCOR, M.; BONILLA, B.; CEPPA, M.; ROGEL, L.; BALMELLI, G.; DALLA RIZZA, M. Effect of different cytokinin sources on in vitro/ex vitro multiplication and rooting rate in Eucalyptus spp. [abstract]. IUFRO Conference 2023. Oral presentation. Agrociencia Uruguay, 2023, Vol.27(NE2), e1248. https://doi.org/10.31285/AGRO.27.1248 -- OPEN ACCESS. Article history: Received 28 Jul 2023; Accepted 01 Sep 2023; Published 20 Nov 2023. -- Correspondence: Facundo Esquivel,
facundoesquivelmn@gmail.com -- License: This work is licensed under a Creative Commons Attribution 4.0...Tipo: Abstracts/Resúmenes |
Biblioteca(s): INIA Las Brujas. |
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49. | | DO CANTO, J.; REYNO, R.; OBERTI, H.; DALLA RIZZA, M.; REAL, D. Ergot and sterility in Bahiagrass: genotypic and environmental effects on seed yield potential. Agronomy, 2023, volume, 13, issue 3, Article 658. OPEN ACCESS. doi: https://doi.org/10.3390/agronomy13030658 Article history: Received 24 November 2022; Revised 19 February 2023; Accepted 21 February 2023; Published 24 February 2023. -- Correspondence author: Daniel Real, email: daniel.real@dpird.wa.gov.au -- This article belongs to the Section...Tipo: Artículos en Revistas Indexadas Internacionales | Circulación / Nivel : Internacional - -- |
Biblioteca(s): INIA Las Brujas. |
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50. | | CASTILLO, A.; VAIO, M.; LÓPEZ CARRO, B.; DALLA RIZZA, M.; REYNO, R. Estrategia de mejoramiento genético en tréboles de importancia económica para aumentar la persistencia y la tolerancia al estrés abiótico. MV 5 - COMUNICACIONES LIBRES - MV. MEJORAMIENTO VEGETAL In: JOURNAL OF BASIC & APPLIED GENETICS, 2016, Vol.27, Iss. 1 (Supp.). XVI LATIN AMERICAN CONGRESS OF GENETICS, IV CONGRESS OF THE URUGUAYAN SOCIETY OF GENETICS, XLIX ANNUAL MEETING OF THE GENETICS SOCIETY OF CHILE, XLV ARGENTINE CONGRESS OF GENETICS, 9-12 October 2016. PROCEEDINGS. Montevideo (Uruguay): SAG, 2016. p. 283Tipo: Trabajos en Congresos/Conferencias |
Biblioteca(s): INIA Las Brujas. |
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51. | | DALLA RIZZA, M.; SCHVARTZMAN, C.; MURCHIO, S.; BERRUETA, C.; BOSCHI, F.; LENZI, A.; GIMÉNEZ, G. Field performance of resistant potato genotypes transformed with the EFR receptor from Arabidopsis thaliana in the absence of bacterial wilt (Ralstonia solanacearum). Research article. The Plant Pathology Journal, 2022, vol.38 (3): 239-247. OPEN ACCESS. doi: https://doi.org/10.5423/PPJ.OA.01.2022.0008 Article history: Received 20 January 2022; Revised 9 May 2022; Accepted 10 May 2022. -- Corresponding author: Marco Dalla-Rizza, Email: mdallarizza@inia.org.uy -- Marco Dalla-Rizza and Claudia Schvartzman contributed equally to this...Tipo: Artículos en Revistas Indexadas Internacionales | Circulación / Nivel : Internacional - -- |
Biblioteca(s): INIA Las Brujas. |
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52. | | BRANDA-SICA, A.; FEDERICI, M.; DUTRA, F.; BRIANO, C.; ROMERO, A.; DALLA RIZZA, M.; LLAMBÍ, S. Genotipado de SNPs relacionados con enfermedades hereditarias en terneras Holando utilizando el panel GGP-BovineLDv3. [Genotyping of SNPs related to hereditary diseases in Holstein heifers using the GGP-BovineLDv3 panel.] Sección: Artículos originales. Veterinaria (Montevideo), 2018, v. 54, no. 210, p. 5-10. -- OPEN ACCESS. Artilce history: Recibido 20 Diciembre 2017; Aceptado 20 Agosto 2018; Publicado 1 Noviembre 2018. -- Correspondencia: A. Branda Sica: abranda@inia.org.uy -- Correspondencia: MT. Federici: mfederici@inia.org.uy -- Publicación de la...Tipo: Artículos en Revistas Indexadas Nacionales | Circulación / Nivel : Nacional - -- |
Biblioteca(s): INIA Las Brujas. |
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53. | | CASTILLO, A.; REBUFFO, M.; DALLA RIZZA, M.; FOLLE, G.; SANTIÑAQUE, F.; BORSANI, O.; MONZA, J. Generation and characterization of interspecific hybrids of Lotus uliginosus × Lotus corniculatus. Crop Science, 2012, v. 52, no. 4, p. 1572-1582. Article history: Published July, 2012.Tipo: Artículos en Revistas Indexadas Internacionales | Circulación / Nivel : A - 1 |
Biblioteca(s): INIA La Estanzuela; INIA Las Brujas. |
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54. | | DALLA RIZZA, M.; REAL, D.; REYNO, R.; QUESENBERRY, K; BURGUEÑO, J; PORRO, V; ERRICO, E. Genetic diversity and DNA content of three South American and three Eurasiatic Trifolium species Genetics and Molecular Biology, 2007, v 30, no. 4, p.1118-1124. Article history: Received: March 16, 2007 / Accepted: May 17, 2007..Tipo: Artículos en Revistas Indexadas Internacionales | Circulación / Nivel : B - 1 |
Biblioteca(s): INIA Las Brujas; INIA Tacuarembó. |
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55. | | OBERTI, H.; SPANGENBERG, G.; COGAN, C.; REYNO, R.; FEIJOO, M.; MURCHIO, S.; DALLA RIZZA, M. Genome-wide analysis of Claviceps paspali: insights into the secretome of the main species causing ergot disease in Paspalum spp. Research article. BMC Genomics, December 2021, Volume 22, Issue 1, Article number 766. Gold Open Access, Green Open Access. doi: https://doi.org/10.1186/s12864-021-08077-0 Article history: Received 24 September 2020; Accepted 11 October 2021; Published 26 October 2021.
Funding: This project was supported by the National Institute of Agricultural Research of Uruguay (INIA) project BT-19, and by project...Tipo: Artículos en Revistas Indexadas Internacionales | Circulación / Nivel : Internacional - -- |
Biblioteca(s): INIA Las Brujas. |
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56. | | REALINI, C. E.; DUCKETT, S. K.; BRITO, G.; DALLA RIZZA, M.; DE MATTOS, D. Effect of pasture vs. concentrate feeding with or without antioxidants on carcass characteristics, fatty acid composition, and quality of Uruguayan beef. Meat Science, March 2004, volume 66, Issue 3, pages 567-577. Article history: Received 17 March 2003 // Received in revised form 13 June 2003 // Accepted 13 June 2003.
This research was funded by the Uruguayan National Institute of Agricultural Research (INIA), Inter-American Development Bank (IDB)...Tipo: Artículos en Revistas Indexadas Internacionales | Circulación / Nivel : A - 1 |
Biblioteca(s): INIA Las Brujas. |
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58. | | REAL, D.; REYNO, R.; DALLA RIZZA, M.; ALTIER, N.; DO CANTO, J.; LARGUERO, S. Evaluación a campo de líneas experimentales de Adesmia bicolor, fechas y métodos de siembra e inoculación. ln: Reunión del grupo técnico en forrajeras del Cono Sur, 22., 2008, Minas, Uruguay Bioma campos: innovando para mantener su sustentabilidad y competitividad. Memorias. Minas (Uruguay): INIA; FAO; PROCISUR, 2008. p. 155-156 Versión impresa y en CD ROM Instituto Nacional de Investigación Agropecuaria, Uruguay; FAO; PROCISUR.Tipo: Trabajos en Congresos/Conferencias |
Biblioteca(s): INIA Las Brujas; INIA Tacuarembó. |
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59. | | PERDOMO FERRANDO, E.; MURCHIO, S.; WALASEK, W.; SCHVARTZMAN, C.; MAESO, D.; DALLA RIZZA, M. Evaluación de eventos de tomate con el gen EFR para el control de bacterias patógenas. [p22]. Bloque 2: Mejoramiento por resistencia a enfermedades. In: Sociedad Uruguaya de Fitopatología Jornada Uruguaya de Fitopatología, 4., Jornada Uruguaya de Protección Vegetal, 2., 1° setiembre, 2017, Montevideo, Uruguay. Libro de resúmenes. Montevideo (UY): Sociedad Uruguay de Fitopatología (SUFIT), 2017. p. 42. Financiamiento: INIA. Proyecto BT _13.Tipo: Abstracts/Resúmenes |
Biblioteca(s): INIA Las Brujas. |
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Registros recuperados : 133 | |
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