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Registro completo
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Biblioteca (s) : |
INIA La Estanzuela. |
Fecha : |
09/09/2020 |
Actualizado : |
05/09/2022 |
Tipo de producción científica : |
Artículos en Revistas Indexadas Internacionales |
Autor : |
RAEGAN HOEFLER; GONZALEZ-BARRIOS , P.; MADHAV BHATTA; NUNES, J.A.R.; BERRO, I.; NALIN, R.S.; BORGES, A.; COVARRUBIAS, E.; DIAZ-GARCIA, L.; QUINCKE, M.; GUTIERREZ, L. |
Afiliación : |
HOEFLER, R., Department of Agronomy, University of Wisconsin?Madison, 1575 Linden Dr., Madison, WI, 53706, USA.; PABLO GONZALEZ-BARRIOS, Dpartment of Agronomy, University of Wisconsin?Madison, 1575 Linden Dr., Madison, WI, 53706, USA.; BHATTA, M., Department of Agronomy, University of Wisconsin?Madison, 1575 Linden Dr., Madison, WI, 53706, USA.; JOSE A. R. NUNES, Department of Agronomy, University of Wisconsin?Madison, 1575 Linden Dr., Madison, WI, 53706, USA.; INES BERRO, Department of Agronomy, University of Wisconsin–Madison, 1575 Linden Dr., Madison, WI, 53706, USA; RAFAEL S. NALIN, Department of Genetics, Escola Superior de Agricultura “Luiz de Queiroz”, Universidade de São Paulo, Piracicaba, São Paulo, 131418-900, Brazil.; ALEJANDRA BORGES, Statistics Department, Facultad de Agronomía, Univesidad de la República, Garzón 780, Montevideo, Uruguay.; EDUARDO COVARRUBIAS, CGIAR Excellence in Breeding Platform (EiB), El Batan, Mexico International Maize and Wheat Improvement Center (CIMMYT), El Batan, Mexico.; LUIS DIAZ-GARCIA, Instituto Nacional de Investigaciones Forestales, Agricolas y Pecuarias, 20676, Aguascalientes, Mexico.; MARTIN CONRADO QUINCKE WALDEN, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; LUCIA GUTIERREZ, Department of Agronomy, University of Wisconsin–Madison, 1575 Linden Dr., Madison, WI, 53706, USA. |
Título : |
Do Spatial Designs Outperform Classic Experimental Designs?. |
Fecha de publicación : |
2020 |
Fuente / Imprenta : |
Journal of Agricultural, Biological, and Environmental Statistics, 1 December 2020, volume 25, number 4, pag.523-552, 1 December 2020. OPEN ACCESS. Doi: https://doi.org/10.1007/s13253-020-00406-2 |
DOI : |
10.1007/s13253-020-00406-2 |
Idioma : |
Inglés |
Notas : |
Article history: Received 15 October 2019/Accepted 01 July 2020/Published 29 August 2020. This project was partially funded through a USDA_AFRI_NIFA_2018-67013-27620 award and by the Hatch Act Formula Fund WISO1984 and WIS03002. Additionally, JARN received funding from CAPES CAPES_PrInt_UFLA 88887.318846_2019-00 as Senior Visiting Professor at the University of Wisconsin-Madison. |
Contenido : |
Controlling spatial variation in agricultural field trials is the most important step to compare treatments efficiently and accurately. Spatial variability can be controlled at the experimental design level with the assignment of treatments to experimental units and at the modeling level with the use of spatial corrections and other modeling strategies. The goal of this study was to compare the efficiency of methods used to control spatial variation in a wide range of scenarios using a simulation approach based on real wheat data. Specifically, classic and spatial experimental designs with and without a twodimensional autoregressive spatial correction were evaluated in scenarios that include differing experimental unit sizes, experiment sizes, relationships among genotypes, genotype by environment interaction levels, and trait heritabilities. Fully replicated designs outperformed partially and unreplicated designs in terms of accuracy; the alpha-lattice incomplete block design was best in all scenarios of the medium-sized experiments.
However, in terms of response to selection, partially replicated experiments that evaluate large population sizes were superior in most scenarios. The AR1×AR1 spatial correction had little benefit in most scenarios except for the medium-sized experiments with the largest experimental unit size and low GE. Overall, the results from this study provide a guide to researchers designing and analyzing large field experiments. Supplementary materials accompanying this paper appear online. MenosControlling spatial variation in agricultural field trials is the most important step to compare treatments efficiently and accurately. Spatial variability can be controlled at the experimental design level with the assignment of treatments to experimental units and at the modeling level with the use of spatial corrections and other modeling strategies. The goal of this study was to compare the efficiency of methods used to control spatial variation in a wide range of scenarios using a simulation approach based on real wheat data. Specifically, classic and spatial experimental designs with and without a twodimensional autoregressive spatial correction were evaluated in scenarios that include differing experimental unit sizes, experiment sizes, relationships among genotypes, genotype by environment interaction levels, and trait heritabilities. Fully replicated designs outperformed partially and unreplicated designs in terms of accuracy; the alpha-lattice incomplete block design was best in all scenarios of the medium-sized experiments.
However, in terms of response to selection, partially replicated experiments that evaluate large population sizes were superior in most scenarios. The AR1×AR1 spatial correction had little benefit in most scenarios except for the medium-sized experiments with the largest experimental unit size and low GE. Overall, the results from this study provide a guide to researchers designing and analyzing large field experiments. Supplementary materials ... Presentar Todo |
Palabras claves : |
AUTOREGRESSIVE PROCESS; EXPERIMENTAL DESIGN; PREDICTION ACCURACY; RANDOMIZATION-BASED EXPERIMENTAL DESIGNS; RESPONSE TO SELECTION; SPATIAL CORRECTION. |
Thesagro : |
DISENO EXPERIMENTAL. |
Asunto categoría : |
-- |
URL : |
http://www.ainfo.inia.uy/digital/bitstream/item/16700/1/JABES-2020.pdf
https://link.springer.com/content/pdf/10.1007/s13253-020-00406-2.pdf
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Marc : |
LEADER 03067naa a2200349 a 4500 001 1061304 005 2022-09-05 008 2020 bl uuuu u00u1 u #d 024 7 $a10.1007/s13253-020-00406-2$2DOI 100 1 $aRAEGAN HOEFLER 245 $aDo Spatial Designs Outperform Classic Experimental Designs?.$h[electronic resource] 260 $c2020 500 $aArticle history: Received 15 October 2019/Accepted 01 July 2020/Published 29 August 2020. This project was partially funded through a USDA_AFRI_NIFA_2018-67013-27620 award and by the Hatch Act Formula Fund WISO1984 and WIS03002. Additionally, JARN received funding from CAPES CAPES_PrInt_UFLA 88887.318846_2019-00 as Senior Visiting Professor at the University of Wisconsin-Madison. 520 $aControlling spatial variation in agricultural field trials is the most important step to compare treatments efficiently and accurately. Spatial variability can be controlled at the experimental design level with the assignment of treatments to experimental units and at the modeling level with the use of spatial corrections and other modeling strategies. The goal of this study was to compare the efficiency of methods used to control spatial variation in a wide range of scenarios using a simulation approach based on real wheat data. Specifically, classic and spatial experimental designs with and without a twodimensional autoregressive spatial correction were evaluated in scenarios that include differing experimental unit sizes, experiment sizes, relationships among genotypes, genotype by environment interaction levels, and trait heritabilities. Fully replicated designs outperformed partially and unreplicated designs in terms of accuracy; the alpha-lattice incomplete block design was best in all scenarios of the medium-sized experiments. However, in terms of response to selection, partially replicated experiments that evaluate large population sizes were superior in most scenarios. The AR1×AR1 spatial correction had little benefit in most scenarios except for the medium-sized experiments with the largest experimental unit size and low GE. Overall, the results from this study provide a guide to researchers designing and analyzing large field experiments. Supplementary materials accompanying this paper appear online. 650 $aDISENO EXPERIMENTAL 653 $aAUTOREGRESSIVE PROCESS 653 $aEXPERIMENTAL DESIGN 653 $aPREDICTION ACCURACY 653 $aRANDOMIZATION-BASED EXPERIMENTAL DESIGNS 653 $aRESPONSE TO SELECTION 653 $aSPATIAL CORRECTION 700 1 $aGONZALEZ-BARRIOS , P. 700 1 $aMADHAV BHATTA 700 1 $aNUNES, J.A.R. 700 1 $aBERRO, I. 700 1 $aNALIN, R.S. 700 1 $aBORGES, A. 700 1 $aCOVARRUBIAS, E. 700 1 $aDIAZ-GARCIA, L. 700 1 $aQUINCKE, M. 700 1 $aGUTIERREZ, L. 773 $tJournal of Agricultural, Biological, and Environmental Statistics, 1 December 2020, volume 25, number 4, pag.523-552, 1 December 2020. OPEN ACCESS. Doi: https://doi.org/10.1007/s13253-020-00406-2
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Registro original : |
INIA La Estanzuela (LE) |
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Registros recuperados : 75 | |
61. | | BRANDARIZ, S.P.; GONZÁELZ-REYMÚNDEZ, A.; LADO, B.; QUINCKE, M.; VON ZITZEWITZ, J.; CASTRO, M.; MATUS, I.; DEL POZO, A.; GUTIÉRREZ, L. Effect of using imputed missing data on QTL detection on a wheat GWAS panel. In: SEMINARIO INTERNACIONAL DE TRIGO, 2014, La Estanzuela, Colonia, UY. GERMÁN, S., et al. (Org.). 1914-2014, un siglo de mejoramiento de trigo en La Estanzuela: un valioso legado para el futuro: posters; resúmenes. La Estanzuela, Colonia, UY: INIA, 2014. p. 86.Biblioteca(s): INIA La Estanzuela. |
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62. | | BRANDARIZ, S.P.; GONZÁLEZ-REYMÚNDEZ, A.; LADO, B.; QUINCKE, M.; VON ZITZEWITZ, J.; CASTRO, M.; MATUS, I.; DEL POZO, A.; GUTIÉRREZ , L. Effect of using imputed missing data on QTL detection on a wheat GWAS panel. [Poster]. In: German, S.; Quincke, M.; Vázquez, D.; Castro, M.; Pereyra, S.; Silva, P.; García, A. (Eds.). Seminario Internacional "1914-2014: Un siglo de mejoramiento de trigo en La Estanzuela". Montevideo (UY): INIA, 2018. p. 304. (INIA Serie Técnica; 241).Biblioteca(s): INIA La Estanzuela. |
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63. | | LADO, B.; MATUS, I.; RODRIGUEZ, A.; INOSTROZA, L.; POLAND, J.; BELZILE ,F.; DEL POZO, A.; QUINCKE, M.; CASTRO, M.; VON ZITZEWITZ, J. Increased genomic prediction accuracy in wheat breeding through spatial adjustment of field trial data. G3: Genes, Genomes, Genetics (Bethesda), v. 3, n,12, p. 2105-2114, 2013.OPEN ACCESS. Article history: Received 2013 Aug 26 // Accepted 2013 Sep 18.Tipo: Artículos en Revistas Indexadas Internacionales | Circulación / Nivel : B - 5 |
Biblioteca(s): INIA La Estanzuela. |
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64. | | RAFFO, M.A.; AZZIMONTI, G.; PEREYRA, S.; PRITSCH, C.; LADO, B.; DREISIGACKER, S.; QUINCKE, M.; CASTRO, A.; SILVA, P.; GARCIA, R.; PEREIRA, F.; GERMAN, S. Introgression of the coupled Fhb1-Sr2 to increase Fusarium head blight and stem rust resistance of elite wheat cultivars. Plant Genetic Resources: Characterization and Utilization, 1-10, 2022. Doi: https://doi.org/10.1017/S1479262122000107 Article history: Received: 1 June 2021/Revised: 20 April 2022/Accepted: 20 April 2022. Author for correspondence: S. Germán, E-mail: sgerman@inia.org.uy. The supplementary material for this article can be found at...Tipo: Artículos en Revistas Indexadas Internacionales | Circulación / Nivel : Internacional - -- |
Biblioteca(s): INIA La Estanzuela. |
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65. | | RAFFO, M.A.; PRITSCH, C.; AZZIMONTI, G.; PEREYRA, S.; QUINCKE, M.; BONNECARRERE, V.; SILVA, P.; CASTRO, A.; LADO, B.; BARAIBAR, S.; GARCIA, R.; GERMAN, S. Introgression of the Coupled Sr2-Fhb1for Resistance to Stem Rust and Fusarium Head Blight into Uruguayan Elite Wheat Cultivars.[Poster] In: Proceedings of the Borlaug Global Rust Initiative Technical Workshop ,14-18 April, 2018, Marrakesh, Marruecos.Biblioteca(s): INIA La Estanzuela. |
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66. | | RAFFO, M.A.; PRITSCH, C.; AZZIMONTI, G.; PEREYRA, S.; QUINCKE, M.; BONNECARRERE, V.; SILVA, P.; CASTRO, A.; LADO, B.; BARAIBAR, S.; PEREYRA, S.; GERMAN, S. Introducción de Fhb1 en germoplasma elite de trigo para incrementar la resistencia a fusariosis de espiga en Uruguay. [p24]. Bloque 2: Mejoramiento por resistencia a enfermedades. In: Sociedad Uruguaya de Fitopatología Jornada Uruguaya de Fitopatología, 4., Jornada Uruguaya de Protección Vegetal, 2., 1° setiembre, 2017, Montevideo, Uruguay. Libro de resúmenes. Montevideo (UY): Sociedad Uruguay de Fitopatología (SUFIT), 2017. p. 44. Financiamiento: Agencia Nacional de Investigación e Innovación (POS_NAC_2016_1_129877).Tipo: Abstracts/Resúmenes |
Biblioteca(s): INIA Las Brujas. |
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67. | | RAEGAN HOEFLER; GONZALEZ-BARRIOS , P.; MADHAV BHATTA; NUNES, J.A.R.; BERRO, I.; NALIN, R.S.; BORGES, A.; COVARRUBIAS, E.; DIAZ-GARCIA, L.; QUINCKE, M.; GUTIERREZ, L. Do Spatial Designs Outperform Classic Experimental Designs?. Journal of Agricultural, Biological, and Environmental Statistics, 1 December 2020, volume 25, number 4, pag.523-552, 1 December 2020. OPEN ACCESS. Doi: https://doi.org/10.1007/s13253-020-00406-2 Article history: Received 15 October 2019/Accepted 01 July 2020/Published 29 August 2020. This project was partially funded through a USDA_AFRI_NIFA_2018-67013-27620 award and by the Hatch Act Formula Fund WISO1984 and WIS03002....Tipo: Artículos en Revistas Indexadas Internacionales | Circulación / Nivel : Internacional - -- |
Biblioteca(s): INIA La Estanzuela. |
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68. | | BARAIBAR, S.; GARCIA, R.; SILVA, P.; LADO, B.; CASTRO, A.; GUTIÉRREZ , L.; KAVANOVÁ, M.; QUINCKE, M.; BHAVANI , S.; RANDHAWA, M.S.; GERMAN, S. QTL of resistance to Ug99 and other stem rust pathogen races in bread wheat. Molecular Breeding, 1 August 2020, Volume 40, Issue 8, Article number 82. DOI: https://doi.org/10.1007/s11032-020-01153-5 Article history: Received 26 June 2019/ Accepted 23 October 2019/ Published 15 August 2020.Tipo: Artículos en Revistas Indexadas Internacionales | Circulación / Nivel : Internacional - -- |
Biblioteca(s): INIA La Estanzuela. |
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69. | | LADO, B.; BATTENFIELD, S. D.; GUZMÁN, C.; QUINCKE, M.; SINGH, R. P.; DREISIGACKER, S.; PEÑA, R. J.; FRITZ, AL.; SILVA, P.; POLAND, J.; GUTIÉRREZ, L. Strategies for selecting crosses using genomic prediction in two wheat breeding programs. The Plant Genome, 2017, v.10, Issue 2, 12p. OPEN ACCESS Article history: Received: Dec 14, 2016 // Accepted: Mar 18, 2017 // Published: July 6, 2017.
B. Lado and S. Battenfield contributed equally.Assigned to Associate Editor Nicholas Tinker.
This is an open access article distributed under...Tipo: Artículos en Revistas Indexadas Internacionales | Circulación / Nivel : Internacional - -- |
Biblioteca(s): INIA Las Brujas. |
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70. | | SEMINARIO INTERNACIONAL DE TRIGO, 2014, LA ESTANZUELA, COLONIA, UY; GERMAN, S.; QUINCKE, M.; VÁZQUEZ, D.; CASTRO, M.; GARCIA-LAMOTHE, A.; PEREYRA, S.; SILVA, P.; RESTAINO, E.; SILVERA, A. (Org.). 1914-2014, un siglo de mejoramiento de trigo en La Estanzuela: un valioso legado para el futuro; resúmenes. La Estanzuela, Colonia, UY: INIA, 2014. 89 p. Encuadernado con espiral doble. Habrá edición posterior de los trabajos completos.Tipo: Trabajos en Congresos/Conferencias |
Biblioteca(s): INIA La Estanzuela. |
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71. | | DEL POZO, A.; LOBOS, G.A.; MATUS, I.; TAPIA, G.; YÁÑEZ, A.; INOSTROZA, L.; RODRÍGUEZ, A.; CASTRO, M.; QUINCKE, M.; VON ZITZEWITZ, J.; LADO, B.; ROMERO, S.; ESCOBAR, A. Caracterización de genotipos de trigo harineros de primavera para tolerancia a estrés hídrico. In: CONGRESO AGRONÓMICO DE CHILE, 63., Temuco, Chile, 2012. Resumen. Temuco: SACH. 2012. p. 58.Tipo: Abstracts/Resúmenes |
Biblioteca(s): INIA La Estanzuela. |
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72. | | BRANDARIZ , S.; GONZÁLEZ RAYMÚNDEZ, A.; LADO, B.; MALOSETTI, M.; FRANCO GARCIA, A.; QUINCKE, M.; VON ZITZEWITZ, J.; CASTRO, M.; MATUS,I.; DEL POZO, A.; CASTRO, A.J.; GUTIÉRREZ, L. Ascertainment bias from imputation methods evaluation in wheat. BMC Genomics, 2016, v. 17, p.773. OPEN ACCESS. Article history: Received 2016 Feb 24 // Accepted 2016 Sep 23.Tipo: Artículos en Revistas Indexadas Internacionales | Circulación / Nivel : A - 1 |
Biblioteca(s): INIA La Estanzuela. |
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73. | | JARDON, M.; ALVAREZ PRADO, S.; SEVERINI, A.D.; FERNÁNDEZ LONG, M.E.; CRESPO, A.O.; CASTRO, M.; QUINCKE, M.; KAVANOVÁ, M.; SCHOLZ DRODOWSKI, R.; CHÁVEZ SANABRIA, P.; PEREZ-GIANMARCO, T.; ALFARO, C.; CASTILLO, D.; MATUS, I.; GÓMEZ, D; SERRAGO, R.; GÓNZALEZ, F.G.; MIRALLES, D.J. CRONOTRIGO 2.0: nueva versión del modelo de predicción fenológica para el cultivo de trigo. In: Revista Técnica de la Asociación Argentina de Productores en Siembra Directa, Abril 2021, Rosario: AAPRESID. p. 53-60. Se incorporaron cambios respecto a la versión original en cuanto al alcance y la precisión del modelo.Tipo: Trabajos en Congresos/Conferencias |
Biblioteca(s): INIA La Estanzuela. |
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74. | | PEREYRA, S.; CASTRO, M.; VERO, S.; SILVA, P.; CAL, A.; TISCORNIA, G.; GONZALEZ, N.; BENTOS, D.; ALVAREZ, W.; RABAZA, S.; SEVILLANO, L.; BRANCATTI, G.; FRANCIA, C.; RAFFO, M.A.; GERMAN, S.; PÉREZ, C.; GARMENDIA, G.; PAREJA, L.; RODRÍGUEZ, A.; PENDAS, C.; QUINCKE, M.; VÁZQUEZ, D.; RODRIGUEZ, M. Fusariosis de la espiga en trigo y micotoxinas asociadas: contribuyendo a reducir su riesgo. Cultivos. Revista INIA Uruguay, Diciembre 2023, no.75 p.54-58. (Revista INIA; 75).Tipo: Artículos en Revistas Agropecuarias |
Biblioteca(s): INIA Las Brujas. |
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75. | | LANGRIDGE, P.; ALAUX, M.; ALMEIDA, N.F.; AMMAR, K.; BAUM, M.; BEKKAOUI, F.; BENTLEY, A.R.; BERES, B.L.; BERGER, B.; BRAUN, H.-J.; BROWN-GUEDIRA, G.; BURT, C.J.; CACCAMO, M.J.; CATTIVELLI, L.; CHARMET, G.; CIVÁN, P.; CLOUTIER, S.; COHAN, J-P.; DEVAUX, P.; DOOHAN, F.M.; DRECCER, M.F.; FERRAHI, M.; GERMAN, S.; GOODWIN, S.B.; GRIFFITHS, S.; GUZMÁN, C.; HANDA, H.; HAWKESFORD, M.J.; HE, Z.; HUTTNER, E.; IKEDA, T.M.; KILIAN, B.; KING, I.P.; KING, J.; KIRKEGAARD, J.A.; LAGE, J.; LE GOUIS, J.; MONDAL, S.; MULLINS, E.; ORDON, F.; ORTIZ-MONASTERIO, J.I.; ÖZKAN, H.; ÖZTÜRK, I.; PEREYRA, S.; POZNIAK, C.J.; QUESNEVILLE, H.; QUINCKE, M.; REBETZKE, G.J.; CHRISTOPH REIF, J.; SAAVEDRA-BRAVO, T.; SCHURR, U.; SHARMA, S.; SINGH, S.K.; SINGH, R.P.; SNAPE, J.W.; TADESSE, W.; TSUJIMOTO, H.; TUBEROSA, R.; WILLIS, T.G.; ZHANG, X. Meeting the challenges facing wheat production: the strategic research agenda of the Global Wheat Initiative. Agronomy, 2022, volume 12, issue 11, 2767. OPEN ACCESS. doi: https://doi.org/10.3390/agronomy12112767 Article history: Received 26 September 2022; Revised 28 October 2022; Accepted 29 October 2022; Published 7 November 2022. -- Academic Editor: Andreas Katsiotis. -- Corresponding author: Langridge, P.; School of Agriculture, Food and...Tipo: Artículos en Revistas Indexadas Internacionales | Circulación / Nivel : Internacional - -- |
Biblioteca(s): INIA Las Brujas. |
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Registros recuperados : 75 | |
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