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 | Acceso al texto completo restringido a Biblioteca INIA Las Brujas. Por información adicional contacte bibliolb@inia.org.uy. |
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Registro completo
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Biblioteca (s) : |
INIA Las Brujas. |
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Fecha : |
17/06/2022 |
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Actualizado : |
17/06/2022 |
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Tipo de producción científica : |
Artículos en Revistas Indexadas Internacionales |
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Autor : |
TONUSSI, R.L.; LONDOÑO-GIL, M.; DE OLIVEIRA SILVA, R.M.; MAGALHÃES, A.F.B.; AMORIM, S:T.; KLUSKA, S.; ESPIGOLAN, R.; PERIPOLLI, E.; PEREIRA, A.S.C.; LÔBO, R.B.; AGUILAR, I.; LOURENÇO, D.A.L.; BALDI, F. |
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Afiliación : |
RAFAEL LARA TONUSSI,, Grupo de Melhoramento Animal, Faculdade de Ciências Agrárias E Veterinárias, Universidade Estadual Paulista Júlio de Mesquita Filho, Jaboticabal, CEP 14884-900, SP, Brazil; MARISOL LONDOÑO-GIL, Grupo de Melhoramento Animal, Faculdade de Ciências Agrárias E Veterinárias, Universidade Estadual Paulista Júlio de Mesquita Filho, Jaboticabal, CEP 14884-900, SP, Brazil; RAFAEL MEDEIROS DE OLIVEIRA SILVA, Zoetis, Kalamazoo, 49007, MI, United States; ANA FABRÍCIA BRAGA MAGALHÃES, Grupo de Melhoramento Animal, Faculdade de Ciências Agrárias E Veterinárias, Universidade Estadual Paulista Júlio de Mesquita Filho, Jaboticabal, CEP 14884-900, SP, Brazil; SABRINA THAISE, Grupo de Melhoramento Animal, Faculdade de Ciências Agrárias E Veterinárias, Universidade Estadual Paulista Júlio de Mesquita Filho, Jaboticabal, CEP 14884-900, SP, Brazil; SABRINA KLUSKA, Grupo de Melhoramento Animal, Faculdade de Ciências Agrárias E Veterinárias, Universidade Estadual Paulista Júlio de Mesquita Filho, Jaboticabal, CEP 14884-900, SP, Brazil; RAFAEL ESPIGOLAN, Grupo de Melhoramento Animal, Faculdade de Ciências Agrárias E Veterinárias, Universidade Estadual Paulista Júlio de Mesquita Filho, Jaboticabal, CEP 14884-900, SP, Brazil; ELISA PERIPOLLI, Grupo de Melhoramento Animal, Faculdade de Ciências Agrárias E Veterinárias, Universidade Estadual Paulista Júlio de Mesquita Filho, Jaboticabal, CEP 14884-900, SP, Brazil; ANGELICA SIMONE CRAVO PEREIRA, Faculdade de Medicina Veterinária E Zootecnia, Universidade de São Paulo, Pirassununga, CEP 13635-900, SP, Brazil; RAYSILDO BARBOSA LÔBO, Associação Nacional de Criadores E Pesquisadores (ANCP), Ribeirão Preto, CEP 14020-230, SP, Brazil; IGNACIO AGUILAR GARCIA, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; DANIELA ANDRESSA LINO LOURENÇO, University of Georgia, Athens, 30602, GA, United States; FERNANDO BALDI, Grupo de Melhoramento Animal, Faculdade de Ciências Agrárias E Veterinárias, Universidade Estadual Paulista Júlio de Mesquita Filho, Jaboticabal, CEP 14884-900, SP, Brazil. |
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Título : |
Accuracy of genomic breeding values and predictive ability for postweaning liveweight and age at first calving in a Nellore cattle population with missing sire information. |
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Fecha de publicación : |
2021 |
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Fuente / Imprenta : |
Tropical Animal Health and Production, 2021, Volume 53, Issue 4, Article number 432. doi: https://doi.org/10.1007/s11250-021-02879-w |
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ISSN : |
0049-4747 |
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DOI : |
10.1007/s11250-021-02879-w |
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Idioma : |
Inglés |
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Notas : |
Article history: Received 19 March 2021; Accepted 30 July 2021; Published online 10 August 2021.
Corresponding author: Londoño-Gil, M.; Grupo de Melhoramento Animal, Faculdade de Ciências Agrárias E Veterinárias, Universidade Estadual Paulista Júlio de Mesquita Filho, Jaboticabal, SP, Brazil; email:londono.gil@unesp.br -- This work was funded by the Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP, grant #2013/25910?0 and #2016/22751?6). |
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Contenido : |
ABSTRACT - The multiple sire system (MSS) is a common mating scheme in extensive beef production systems. However, MSS does not allow paternity identification and lead to inaccurate genetic predictions. The objective of this study was to investigate the implementation of single-step genomic BLUP (ssGBLUP) in different scenarios of uncertain paternity in the evaluation for 450-day adjusted liveweight (W450) and age at first calving (AFC) in a Nellore cattle population. To estimate the variance components using BLUP and ssGBLUP, the relationship matrix (A) with different proportions of animals with missing sires (MS) (scenarios 0, 25, 50, 75, and 100% of MS) was created. The genotyped animals with MS were randomly chosen, and ten replicates were performed for each scenario and trait. Five groups of animals were evaluated in each scenario: PHE, all animals with phenotypic records in the population; SIR, proven sires; GEN, genotyped animals; YNG, young animals without phenotypes and progeny; and YNGEN, young genotyped animals. The additive genetic variance decreased for both traits as the proportion of MS increased in the population when using the regular REML. When using the ssGBLUP, accuracies ranged from 0.13 to 0.47 for W450 and from 0.10 to 0.25 for AFC. For both traits, the prediction ability of the direct genomic value (DGV) decreased as the percentage of MS increased. These results emphasize that indirect prediction via DGV of young animals is more accurate when the SNP effects are derived from ssGBLUP with a reference population with known sires. The ssGBLUP could be applied in situations of uncertain paternity, especially when selecting young animals. This methodology is shown to be accurate, mainly in scenarios with a high percentage of MS. © 2021, The Author(s), under exclusive licence to Springer Nature B.V. MenosABSTRACT - The multiple sire system (MSS) is a common mating scheme in extensive beef production systems. However, MSS does not allow paternity identification and lead to inaccurate genetic predictions. The objective of this study was to investigate the implementation of single-step genomic BLUP (ssGBLUP) in different scenarios of uncertain paternity in the evaluation for 450-day adjusted liveweight (W450) and age at first calving (AFC) in a Nellore cattle population. To estimate the variance components using BLUP and ssGBLUP, the relationship matrix (A) with different proportions of animals with missing sires (MS) (scenarios 0, 25, 50, 75, and 100% of MS) was created. The genotyped animals with MS were randomly chosen, and ten replicates were performed for each scenario and trait. Five groups of animals were evaluated in each scenario: PHE, all animals with phenotypic records in the population; SIR, proven sires; GEN, genotyped animals; YNG, young animals without phenotypes and progeny; and YNGEN, young genotyped animals. The additive genetic variance decreased for both traits as the proportion of MS increased in the population when using the regular REML. When using the ssGBLUP, accuracies ranged from 0.13 to 0.47 for W450 and from 0.10 to 0.25 for AFC. For both traits, the prediction ability of the direct genomic value (DGV) decreased as the percentage of MS increased. These results emphasize that indirect prediction via DGV of young animals is more accurate when the SNP ... Presentar Todo |
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Palabras claves : |
Age at first calving; Animals; Beef cattle; Genomic evaluation; Genomics; Uncertain paternity; Weight. |
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Asunto categoría : |
L10 Genética y mejoramiento animal |
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Marc : |
LEADER 03536naa a2200385 a 4500
001 1063326
005 2022-06-17
008 2021 bl uuuu u00u1 u #d
022 $a0049-4747
024 7 $a10.1007/s11250-021-02879-w$2DOI
100 1 $aTONUSSI, R.L.
245 $aAccuracy of genomic breeding values and predictive ability for postweaning liveweight and age at first calving in a Nellore cattle population with missing sire information.$h[electronic resource]
260 $c2021
500 $aArticle history: Received 19 March 2021; Accepted 30 July 2021; Published online 10 August 2021. Corresponding author: Londoño-Gil, M.; Grupo de Melhoramento Animal, Faculdade de Ciências Agrárias E Veterinárias, Universidade Estadual Paulista Júlio de Mesquita Filho, Jaboticabal, SP, Brazil; email:londono.gil@unesp.br -- This work was funded by the Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP, grant #2013/25910?0 and #2016/22751?6).
520 $aABSTRACT - The multiple sire system (MSS) is a common mating scheme in extensive beef production systems. However, MSS does not allow paternity identification and lead to inaccurate genetic predictions. The objective of this study was to investigate the implementation of single-step genomic BLUP (ssGBLUP) in different scenarios of uncertain paternity in the evaluation for 450-day adjusted liveweight (W450) and age at first calving (AFC) in a Nellore cattle population. To estimate the variance components using BLUP and ssGBLUP, the relationship matrix (A) with different proportions of animals with missing sires (MS) (scenarios 0, 25, 50, 75, and 100% of MS) was created. The genotyped animals with MS were randomly chosen, and ten replicates were performed for each scenario and trait. Five groups of animals were evaluated in each scenario: PHE, all animals with phenotypic records in the population; SIR, proven sires; GEN, genotyped animals; YNG, young animals without phenotypes and progeny; and YNGEN, young genotyped animals. The additive genetic variance decreased for both traits as the proportion of MS increased in the population when using the regular REML. When using the ssGBLUP, accuracies ranged from 0.13 to 0.47 for W450 and from 0.10 to 0.25 for AFC. For both traits, the prediction ability of the direct genomic value (DGV) decreased as the percentage of MS increased. These results emphasize that indirect prediction via DGV of young animals is more accurate when the SNP effects are derived from ssGBLUP with a reference population with known sires. The ssGBLUP could be applied in situations of uncertain paternity, especially when selecting young animals. This methodology is shown to be accurate, mainly in scenarios with a high percentage of MS. © 2021, The Author(s), under exclusive licence to Springer Nature B.V.
653 $aAge at first calving
653 $aAnimals
653 $aBeef cattle
653 $aGenomic evaluation
653 $aGenomics
653 $aUncertain paternity
653 $aWeight
700 1 $aLONDOÑO-GIL, M.
700 1 $aDE OLIVEIRA SILVA, R.M.
700 1 $aMAGALHÃES, A.F.B.
700 1 $aAMORIM, S:T.
700 1 $aKLUSKA, S.
700 1 $aESPIGOLAN, R.
700 1 $aPERIPOLLI, E.
700 1 $aPEREIRA, A.S.C.
700 1 $aLÔBO, R.B.
700 1 $aAGUILAR, I.
700 1 $aLOURENÇO, D.A.L.
700 1 $aBALDI, F.
773 $tTropical Animal Health and Production, 2021, Volume 53, Issue 4, Article number 432. doi: https://doi.org/10.1007/s11250-021-02879-w
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INIA Las Brujas (LB) |
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Registro completo
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Biblioteca (s) : |
INIA La Estanzuela. |
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Fecha actual : |
01/09/2021 |
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Actualizado : |
29/11/2022 |
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Tipo de producción científica : |
Artículos en Revistas Indexadas Internacionales |
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Circulación / Nivel : |
Internacional - -- |
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Autor : |
FERNÁNDEZ-CIGANDA S; FRAGA, M.; ZUNINO, P. |
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Afiliación : |
SOFIA FERNÁNDEZ CIGANDA, Department of Microbiology, Instituto de Investigaciones Biológicas Clemente Estable, Montevideo, Uruguay.; MARTIN FRAGA COTELO, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; PABLO ZUNINO, Department of Microbiology, Instituto de Investigaciones Biológicas Clemente Estable, Montevideo, Uruguay. |
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Título : |
Probiotic lactobacilli administration induces changes in the fecal microbiota of preweaned dairy calves. |
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Fecha de publicación : |
2022 |
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Fuente / Imprenta : |
Probiotics and Antimicrobial Proteins, 2022, volume 14, issue 5, pages 804-815. Doi: https://doi.org/10.1007/s12602-021-09834-z |
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DOI : |
10.1007/s12602-021-09834-z |
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Idioma : |
Inglés |
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Notas : |
Article history: Accepted 04 August 2021/ Published 14 August 2021 |
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Contenido : |
Abstract:
Early microbial colonization is a determinant factor in animal health, and probiotic administration has been demonstrated to modulate intestinal microbiota and promote health in dairy calves. The objective of this study was to evaluate changes in calves' fecal microbiota after the administration of two probiotic lactobacilli strains that had previously exhibited benefcial efects in calves' health in relation to neonatal calf diarrhea. An in vivo assay was performed with 30 newborn male Holstein calves that were divided into three groups. Two groups were orally administered with two diferent lactobacilli strains (Lactobacillus johnsonii TP1.6 or Limosilactobacillus reuteri TP1.3B), and the third was the control group. Calves (5 to 9 days old) were administered with freeze-dried bacteria once a day for 10 consecutive days. Feces samples were taken before the frst administration (day 0) and then again on days 10 and 21, and the V4 region of the bacterial 16S ribosomal gene was sequenced with an Illumina MiSeq 250 paired-end platform. The administration of both strains signifcantly afected the total
bacterial community composition, and the efect lasted for 11 days after the last dose. In particular, amplicon sequence variants related to Bifdobacterium and Akkermansia genera were signifcantly higher in both treated groups. Therefore, modulation of the intestinal microbiota is a potential mechanism of action behind the benefcial efects of these probiotic strains. © 2021, The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature. MenosAbstract:
Early microbial colonization is a determinant factor in animal health, and probiotic administration has been demonstrated to modulate intestinal microbiota and promote health in dairy calves. The objective of this study was to evaluate changes in calves' fecal microbiota after the administration of two probiotic lactobacilli strains that had previously exhibited benefcial efects in calves' health in relation to neonatal calf diarrhea. An in vivo assay was performed with 30 newborn male Holstein calves that were divided into three groups. Two groups were orally administered with two diferent lactobacilli strains (Lactobacillus johnsonii TP1.6 or Limosilactobacillus reuteri TP1.3B), and the third was the control group. Calves (5 to 9 days old) were administered with freeze-dried bacteria once a day for 10 consecutive days. Feces samples were taken before the frst administration (day 0) and then again on days 10 and 21, and the V4 region of the bacterial 16S ribosomal gene was sequenced with an Illumina MiSeq 250 paired-end platform. The administration of both strains signifcantly afected the total
bacterial community composition, and the efect lasted for 11 days after the last dose. In particular, amplicon sequence variants related to Bifdobacterium and Akkermansia genera were signifcantly higher in both treated groups. Therefore, modulation of the intestinal microbiota is a potential mechanism of action behind the benefcial efects of these probiotic strains. © 2021... Presentar Todo |
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Palabras claves : |
Calves; Lactobacilli; Microbiota; PLATAFORMA DE INVESTIGACIÓN EN SALUD ANIMAL; PLATAFORMA DE SALUD ANIMAL; Probiotics. |
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Asunto categoría : |
-- |
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Marc : |
LEADER 02485naa a2200241 a 4500
001 1062384
005 2022-11-29
008 2022 bl uuuu u00u1 u #d
024 7 $a10.1007/s12602-021-09834-z$2DOI
100 1 $aFERNÁNDEZ-CIGANDA S
245 $aProbiotic lactobacilli administration induces changes in the fecal microbiota of preweaned dairy calves.$h[electronic resource]
260 $c2022
500 $aArticle history: Accepted 04 August 2021/ Published 14 August 2021
520 $aAbstract: Early microbial colonization is a determinant factor in animal health, and probiotic administration has been demonstrated to modulate intestinal microbiota and promote health in dairy calves. The objective of this study was to evaluate changes in calves' fecal microbiota after the administration of two probiotic lactobacilli strains that had previously exhibited benefcial efects in calves' health in relation to neonatal calf diarrhea. An in vivo assay was performed with 30 newborn male Holstein calves that were divided into three groups. Two groups were orally administered with two diferent lactobacilli strains (Lactobacillus johnsonii TP1.6 or Limosilactobacillus reuteri TP1.3B), and the third was the control group. Calves (5 to 9 days old) were administered with freeze-dried bacteria once a day for 10 consecutive days. Feces samples were taken before the frst administration (day 0) and then again on days 10 and 21, and the V4 region of the bacterial 16S ribosomal gene was sequenced with an Illumina MiSeq 250 paired-end platform. The administration of both strains signifcantly afected the total bacterial community composition, and the efect lasted for 11 days after the last dose. In particular, amplicon sequence variants related to Bifdobacterium and Akkermansia genera were signifcantly higher in both treated groups. Therefore, modulation of the intestinal microbiota is a potential mechanism of action behind the benefcial efects of these probiotic strains. © 2021, The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature.
653 $aCalves
653 $aLactobacilli
653 $aMicrobiota
653 $aPLATAFORMA DE INVESTIGACIÓN EN SALUD ANIMAL
653 $aPLATAFORMA DE SALUD ANIMAL
653 $aProbiotics
700 1 $aFRAGA, M.
700 1 $aZUNINO, P.
773 $tProbiotics and Antimicrobial Proteins, 2022, volume 14, issue 5, pages 804-815. Doi: https://doi.org/10.1007/s12602-021-09834-z
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