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![](/consulta/web/img/deny.png) | Acceso al texto completo restringido a Biblioteca INIA Treinta y Tres. Por información adicional contacte bibliott@inia.org.uy. |
Registro completo
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Biblioteca (s) : |
INIA Treinta y Tres. |
Fecha : |
11/05/2018 |
Actualizado : |
28/05/2019 |
Tipo de producción científica : |
Artículos en Revistas Indexadas Internacionales |
Autor : |
MONTEVERDE, E.; ROSAS, J.E.; BLANCO, P.H.; PÉREZ DE VIDA, F.; BONNECARRERE, V.; QUERO, G.; GUTIERREZ, L.; MCCOUCH, S. |
Afiliación : |
ELIANA MONTEVERDE, Plant Breeding and Genetics Section, School of Integrative Plant Science, Cornell University, USA.; JUAN EDUARDO ROSAS CAISSIOLS, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; PEDRO HORACIO BLANCO BARRAL, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; FERNANDO BLAS PEREZ DE VIDA, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; MARIA VICTORIA BONNECARRERE MARTINEZ, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; GASTÓN QUERO CORRALLO, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; LUCÍA GUTIERREZ, Department of Agronomy, University of Wisconsin, WI, USA.; SUSAN MCCOUCH, Plant Breeding and Genetics Section, School of Integrative Plant Science, Cornell University, USA. |
Título : |
Multienvironment models increase prediction accuracy of complex traits in advanced breeding lines of rice (O. sativa). |
Fecha de publicación : |
2018 |
Fuente / Imprenta : |
Crop Science, 2018, 58:1519-1530. |
DOI : |
10.2135/cropsci2017.09.0564 |
Idioma : |
Inglés |
Notas : |
Article history: Accepted on May 09, 2018. Published online June 21, 2018. |
Contenido : |
ABSTRACT: Genotype x environment interaction (G x E) is the differential response of genotypes in different environments and represents a major challenge for breeders. Genotype x year-interaction (G x Y) is a relevant component of G x E, and accounting for it is an important strategy for identifying lines with stable and superior performance across years. In this study, we compared the prediction accuracy of modeling G x Y using covariance structures that differ in their ability to
accommodate correlation among environments.
We present the use of these approaches in two different rice (Oryza sativa L.) breeding populations (indica and tropical japonica) for predicting grain yield, plant height, and three milling quality traits—milling yield, head rice percentage, and grain chalkiness—under different cross-validation (CV) scenarios. We also compared model performance in the context of global predictions (i.e., predictions across years). Most of the benefits of multienvironment models come from modeling genetic correlations between environments when predicting performance of lines that have been tested in some environments but not others (CV2). For predicting the performance of newly developed lines (CV1), modeling between environment correlations has no effect compared with considering environments independently. Response to selection of multienvironment models when modeling covariance structures that accommodate covariances between environments was always beneficial when predicting the performance of lines across years. We also show that, for some traits, high prediction accuracies can be obtained in untested years, which is important for resource allocation in small breeding programs. MenosABSTRACT: Genotype x environment interaction (G x E) is the differential response of genotypes in different environments and represents a major challenge for breeders. Genotype x year-interaction (G x Y) is a relevant component of G x E, and accounting for it is an important strategy for identifying lines with stable and superior performance across years. In this study, we compared the prediction accuracy of modeling G x Y using covariance structures that differ in their ability to
accommodate correlation among environments.
We present the use of these approaches in two different rice (Oryza sativa L.) breeding populations (indica and tropical japonica) for predicting grain yield, plant height, and three milling quality traits—milling yield, head rice percentage, and grain chalkiness—under different cross-validation (CV) scenarios. We also compared model performance in the context of global predictions (i.e., predictions across years). Most of the benefits of multienvironment models come from modeling genetic correlations between environments when predicting performance of lines that have been tested in some environments but not others (CV2). For predicting the performance of newly developed lines (CV1), modeling between environment correlations has no effect compared with considering environments independently. Response to selection of multienvironment models when modeling covariance structures that accommodate covariances between environments was always beneficial when pr... Presentar Todo |
Palabras claves : |
GENOTYPE X ENVIRONMENT INTERACTION; INTERACCIONES GENOTIPO-AMBIENTE. |
Thesagro : |
ARROZ; GENOTIPOS; RICE. |
Asunto categoría : |
F30 Genética vegetal y fitomejoramiento |
Marc : |
LEADER 02635naa a2200289 a 4500 001 1058574 005 2019-05-28 008 2018 bl uuuu u00u1 u #d 024 7 $a10.2135/cropsci2017.09.0564$2DOI 100 1 $aMONTEVERDE, E. 245 $aMultienvironment models increase prediction accuracy of complex traits in advanced breeding lines of rice (O. sativa).$h[electronic resource] 260 $c2018 500 $aArticle history: Accepted on May 09, 2018. Published online June 21, 2018. 520 $aABSTRACT: Genotype x environment interaction (G x E) is the differential response of genotypes in different environments and represents a major challenge for breeders. Genotype x year-interaction (G x Y) is a relevant component of G x E, and accounting for it is an important strategy for identifying lines with stable and superior performance across years. In this study, we compared the prediction accuracy of modeling G x Y using covariance structures that differ in their ability to accommodate correlation among environments. We present the use of these approaches in two different rice (Oryza sativa L.) breeding populations (indica and tropical japonica) for predicting grain yield, plant height, and three milling quality traits—milling yield, head rice percentage, and grain chalkiness—under different cross-validation (CV) scenarios. We also compared model performance in the context of global predictions (i.e., predictions across years). Most of the benefits of multienvironment models come from modeling genetic correlations between environments when predicting performance of lines that have been tested in some environments but not others (CV2). For predicting the performance of newly developed lines (CV1), modeling between environment correlations has no effect compared with considering environments independently. Response to selection of multienvironment models when modeling covariance structures that accommodate covariances between environments was always beneficial when predicting the performance of lines across years. We also show that, for some traits, high prediction accuracies can be obtained in untested years, which is important for resource allocation in small breeding programs. 650 $aARROZ 650 $aGENOTIPOS 650 $aRICE 653 $aGENOTYPE X ENVIRONMENT INTERACTION 653 $aINTERACCIONES GENOTIPO-AMBIENTE 700 1 $aROSAS, J.E. 700 1 $aBLANCO, P.H. 700 1 $aPÉREZ DE VIDA, F. 700 1 $aBONNECARRERE, V. 700 1 $aQUERO, G. 700 1 $aGUTIERREZ, L. 700 1 $aMCCOUCH, S. 773 $tCrop Science, 2018, 58:1519-1530.
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3. | ![Imagen marcada / sin marcar](/consulta/web/img/desmarcado.png) | GUTIÉRREZ, L.; LADO, B.; GONZÁLEZ, P.; SILVA, P.; QUINCKE, M. Handling Genotype-By-Environment Interaction in Genomic Selection to Predict New Genotypes and New Environments. [P0814] In: International Plant & Animal Genome, Conference PAG XXIV, "The largest Ag-genomics Meeting in the World San Diego, CA, USA; January 9-13, 2016. [Abstract] .Tipo: Abstracts/Resúmenes |
Biblioteca(s): INIA Las Brujas. |
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5. | ![Imagen marcada / sin marcar](/consulta/web/img/desmarcado.png) | PÉREZ, O.; VIEGA, L.; GUTIÉRREZ, L.; CASTRO, M. Post-anthesis water deficit in spring wheat: effects on yield components and relative water content. In: SEMINARIO INTERNACIONAL DE TRIGO, 2014, La Estanzuela, Colonia, UY. GERMÁN, S., et al. (Org.). 1914-2014, un siglo de mejoramiento de trigo en La Estanzuela: un valioso legado para el futuro: resúmenes; posters. La Estanzuela, Colonia, UY: INIA, 2014. p. 41.Biblioteca(s): INIA La Estanzuela. |
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6. | ![Imagen marcada / sin marcar](/consulta/web/img/desmarcado.png) | PÉREZ, O.; VIEGA, L.; GUTIERREZ, L.; CASTRO, M. Post-anthesis water deficit in spring wheat: effects on yield components and relative water content. [Poster]. In: German, S.; Quincke, M.; Vázquez, D.; Castro, M.; Pereyra, S.; Silva, P.; García, A. (Eds.). Seminario Internacional "1914-2014: Un siglo de mejoramiento de trigo en La Estanzuela". Montevideo (UY): INIA, 2018. P.130. (INIA Serie Técnica; 241).Biblioteca(s): INIA La Estanzuela. |
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7. | ![Imagen marcada / sin marcar](/consulta/web/img/desmarcado.png) | GUTIÉRREZ, L.; BERBERIAN, N.; CAPETTINI, F.; GERMAN, S.; PEREYRA, S.; PÉREZ, C.; CASTRO, A. Disease resistance QTLs in barley germplasm from Latin America In: INTERNATIONAL ANIMAL AND PLANT GENOME CONFERENCE, 20., 2012, San Diego, CA, US. Posters: wheat, barley, oat, and related. P0350. [s.l.: INTL-PAG], 2012.Biblioteca(s): INIA La Estanzuela. |
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8. | ![Imagen marcada / sin marcar](/consulta/web/img/desmarcado.png) | CAJARVILLE, C.; BRITOS, A.; ERRANDONEA, N.; GUTIÉRREZ, L.; COZZOLINO, D.; REPETTO, J.L. Diurnal changes in water-soluble carbohydrate concentration in lucerne and tall fescue in autumn and the effects on in vitro fermentation. Research Article. New Zealand Journal of Agricultural Research, 2015, v. 58, no.3, p. 281-291. Article history: Received 23 January 2014 // Accepted 5 February 2015.Tipo: Artículos en Revistas Indexadas Internacionales | Circulación / Nivel : Internacional - -- |
Biblioteca(s): INIA Las Brujas. |
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9. | ![Imagen marcada / sin marcar](/consulta/web/img/desmarcado.png) | PEREYRA, S.; GERMAN, S.; GONZÁLEZ, S.N.; CASTRO, A.; GAMBA, F.; GUTIERREZ, L. Advances in the integrated management of leaf blotches in Uruguay. In: International Workshop on Barley Leaf Diseases , 2o. Rabat, Morocco: The International Center for Agricultural Research in the Dry Areas (ICARDA), April 5-7, 2017. p. 46.Tipo: Abstracts/Resúmenes |
Biblioteca(s): INIA La Estanzuela. |
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10. | ![Imagen marcada / sin marcar](/consulta/web/img/desmarcado.png) | BORGES, A.; GONZÁLEZ-REYMUNDEZ, A.; ERNST, O.; CADENAZZI, M.; TERRA, J.A.; GUTIÉRREZ, L. Can spatial modeling substitute experimental design in agricultural experiments? Crop Science, 2018, v. 59, no. 1, p. 1-10. Article history: Accepted paper, posted 10/05/18. Published online December, 13. 2018.Tipo: Artículos en Revistas Indexadas Internacionales | Circulación / Nivel : Internacional - -- |
Biblioteca(s): INIA Treinta y Tres. |
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11. | ![Imagen marcada / sin marcar](/consulta/web/img/desmarcado.png) | GUTIERREZ, L.; BORGES, A.; QUERO, G.; GONZALEZ-REYMUNDEZ, A.; BERRO, I.; LADO, B.; CASTRO, A. Biostatistical tools for plant breeding in the genomics era. In: German, S.; Quincke, M.; Vázquez, D.; Castro, M.; Pereyra, S.; Silva, P.; García, A. (Eds.). Seminario Internacional "1914-2014: Un siglo de mejoramiento de trigo en La Estanzuela". Montevideo (UY): INIA, 2018. p.46-57. (INIA Serie Técnica; 241).Tipo: Capítulo en Libro Técnico-Científico |
Biblioteca(s): INIA La Estanzuela. |
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12. | ![Imagen marcada / sin marcar](/consulta/web/img/desmarcado.png) | LADO,B.; BATTENFIELD, S.; POLAND, J.; QUINCKE, M.; SILVA, P.; GUTIÉRREZ, L. Comparación de metodologías de predicción de cruzamientos para rendimiento en trigo. MV 14 - COMUNICACIONES LIBRES - MV. MEJORAMIENTO VEGETAL In: JOURNAL OF BASIC & APPLIED GENETICS, 2016, Vol.27, Iss. 1 (Supp.). XVI LATIN AMERICAN CONGRESS OF GENETICS, IV CONGRESS OF THE URUGUAYAN SOCIETY OF GENETICS, XLIX ANNUAL MEETING OF THE GENETICS SOCIETY OF CHILE, XLV ARGENTINE CONGRESS OF GENETICS, 9-12 October 2016. PROCEEDINGS. Montevideo (Uruguay): SAG, 2016 p. 287.Tipo: Trabajos en Congresos/Conferencias |
Biblioteca(s): INIA La Estanzuela. |
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13. | ![Imagen marcada / sin marcar](/consulta/web/img/desmarcado.png) | PORTA, B.; CONDON, F.; BONNECARRERE, V.; GUTIÉRREZ, L.; FRANCO, J.; GALVÁN, G. Diversidad y estructura genética del germoplasma de maíz blanco dentad de Uruguay mediante microsatélites. [Resumen]. In: SIMPÓSIO DE RECURSOS GENÉTICOS PARA A AMÉRICA LATINA E CARIBE, 10., 2015, Bento Gonçalves. Recursos genéticos no século 21: de Vavilov a Svalbard. Anais... [s.l.]: Sociedade Brasileira de Recursos Genéticos, 2015. p.65. Agradecimientos: Comisión Sectorial de Investigación Científica, CSIC - UdelaR, Uruguay.Tipo: Abstracts/Resúmenes |
Biblioteca(s): INIA Las Brujas. |
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14. | ![Imagen marcada / sin marcar](/consulta/web/img/desmarcado.png) | REBOLLO, I.; AGUILAR, I.; PÉREZ DE VIDA, F.; MOLINA, F.; GUTIÉRREZ, L.; ROSAS, J.E. Genotype by environment interaction characterization and its modeling with random regression to climatic variables in two rice breeding populations. Original article. Crop Science. 2023, Volume 63, Issue 4, Pages 2220-2240. https://doi.org/10.1002/csc2.21029 -- OPEN ACCESS. Article history: Received 21 November 2022, Accepted 10 May 2023, Published online 16 June 2023. -- Correspondence: Rosas, J.E.; INIA, Estación Experimental Treinta y Tres, Road 8 km 281, Treinta y Tres, Uruguay; email:jrosas@inia.org.uy...Tipo: Artículos en Revistas Indexadas Internacionales | Circulación / Nivel : Internacional - -- |
Biblioteca(s): INIA Las Brujas. |
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15. | ![Imagen marcada / sin marcar](/consulta/web/img/desmarcado.png) | QUERO, C.; FERNANDEZ, S.; BRANDARIZ, S.B.; SIMONDI, S.; GUTIÉRREZ, L. Herramientas de análisis y visualización genómica. MV 10 - COMUNICACIONES LIBRES - MV. MEJORAMIENTO VEGETAL In: JOURNAL OF BASIC & APPLIED GENETICS, 2016, Vol.27, Iss. 1 (Supp.). XVI LATIN AMERICAN CONGRESS OF GENETICS, IV CONGRESS OF THE URUGUAYAN SOCIETY OF GENETICS, XLIX ANNUAL MEETING OF THE GENETICS SOCIETY OF CHILE, XLV ARGENTINE CONGRESS OF GENETICS, 9-12 October 2016. PROCEEDINGS. Montevideo (Uruguay): SAG, 2016. p. 285Tipo: Trabajos en Congresos/Conferencias |
Biblioteca(s): INIA Las Brujas. |
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18. | ![Imagen marcada / sin marcar](/consulta/web/img/desmarcado.png) | BERBERIAN, N.; CASTRO, A.; CAPETTINI, F.; FROS, D.; GERMAN, S.; PEREYRA, S.; PEREZ, C.; GUTIÉRREZ, L. Modelos mixtos para la identificación de QTL para enfermedades en cebada a traves de mapeo asociativo. In: REUNIÓN CIENTIFICA DEL GRUPO ARGENTINO DE BIOMETRÍA, 16., 2011, Salta, AR. Libro de resúmenes: modelos lineales y generalizados mixtos. La Plata: GAB, 2011. p. 108.Tipo: Abstracts/Resúmenes |
Biblioteca(s): INIA La Estanzuela. |
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19. | ![Imagen marcada / sin marcar](/consulta/web/img/desmarcado.png) | GONZÁLEZ BARRIOS, P.; PÉREZ, O.; CASTRO, M.; CERETTA, S.; VILARO, D.; GUTIÉRREZ, L. Identificación de limitantes a la expresión del potencial de rendimiento en girasol en Uruguay mediante GGE biplots y PLS regression. In: IV Encuentro Iberoamericano de Biometría; 4o. y XVIII Reunión Científica del GAB, 17o., Setiembre 2013, Mar del Plata ,ROMERO, M.C.; MARINELLI, C.; CEPEDA, R. Eds., La Plata, Bs As, Argentina: Grupo Argentino de Biometría. p. 236-239Tipo: Abstracts/Resúmenes |
Biblioteca(s): INIA La Estanzuela. |
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20. | ![Imagen marcada / sin marcar](/consulta/web/img/desmarcado.png) | LADO, B.; VÁZQUEZ, D.; QUINCKE, M.; SILVA, P.; AGUILAR, I.; GUTIÉRREZ, L. Resource allocation optimization with multi-trait genomic prediction for bread wheat (Triticum aestivum L.) baking quality. [Original article]. Theoretical and Applied Genetics, 1 December 2018, Volume 131, Issue 12, pp. 2719-2731. OPEN ACCESS. Article history: Received: 29 January 2018 / Accepted: 10 September 2018 / Published online: 19 September 2018.
Supplementary materials.
Acknowledgements: We express our appreciation for the effort of the technical personnel of INIA La...Tipo: Artículos en Revistas Indexadas Internacionales | Circulación / Nivel : Internacional - -- |
Biblioteca(s): INIA Las Brujas. |
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