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Registro completo
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Biblioteca (s) : |
INIA Las Brujas. |
Fecha : |
27/07/2022 |
Actualizado : |
27/02/2023 |
Tipo de producción científica : |
Trabajos en Congresos/Conferencias |
Autor : |
LOURENCO, D.; TSURUTA, S.; AGUILAR, I.; MASUDA, Y.; BERMANN, M.; LEGARRA, A.; MISZTAL, I. |
Afiliación : |
D. LOURENCO, University of Georgia, Department of Animal and Dairy Science, 30602, Athens, GA, USA; S. TSURUTA, University of Georgia, Department of Animal and Dairy Science, 30602, Athens, GA, USA; IGNACIO AGUILAR GARCIA, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; Y. MASUDA, Rakuno Gakuen University, 069-8501, Ebetsu, Hokkaido, Japan; M. BERMANN, University of Georgia, Department of Animal and Dairy Science, 30602, Athens, GA, USA; A. LEGARRA, Institut national de recherche pour l'agriculture, l'alimentation et l'environnement, UMR1388 GenPhySE, 31326, Castanet Tolosan, France; I. MISZTAL, University of Georgia, Department of Animal and Dairy Science, 30602, Athens, GA, USA. |
Título : |
Recent updates in the BLUPF90 software suite. [366]. |
Complemento del título : |
Part 19 - Methods and tools: software and computing strategies. |
Fecha de publicación : |
2022 |
Fuente / Imprenta : |
In: Proceedings of the World Congress on Genetics Applied to Livestock Production (WCGALP), 12., Rotterdam, the Netherlands, 3-8 July 2022. doi: https://doi.org/10.3920/978-90-8686-940-4_366 |
Páginas : |
1530-1533. |
DOI : |
10.3920/978-90-8686-940-4_366 |
Idioma : |
Inglés |
Notas : |
Article history: Published online: February 9, 2023. -- Corresponding author: D. Lourenco, email: danilino@uga.edu |
Contenido : |
ABSTRACT.- BLUPF90 is a flexible software suite that estimates variance components, cross-classified and covariate effects, breeding values, accuracies, and SNP effects, among others. It is based on mixed models and focuses mainly on animal breeding and genetics applications. This collection of software is continually under development to incorporate new methods and algorithms, improve efficiency, and broaden usage. A significant change undergoing BLUPF90 is the merge of variance components and breeding values estimation software. Some of the recent developments include the implementation of p-values for SNP effects in single-step GWAS, a new algorithm to approximate reliability or accuracy of GEBV, the inclusion of metafounders or unknown parent groups in ssGBLUP to set the base populations, and several optimizations to speed up computing time with many genotyped animals. BLUPF90 is a resourceful collection of efficient software that handles millions of genotyped animals and dozens of millions of records or individuals in pedigree. |
Palabras claves : |
BLUP program; BLUPF90 software. |
Asunto categoría : |
L10 Genética y mejoramiento animal |
URL : |
http://www.ainfo.inia.uy/digital/bitstream/item/16999/1/978-90-8686-940-4-366.pdf
https://www.wageningenacademic.com/doi/epdf/10.3920/978-90-8686-940-4_366
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Marc : |
LEADER 01960nam a2200241 a 4500 001 1063464 005 2023-02-27 008 2022 bl uuuu u01u1 u #d 024 7 $a10.3920/978-90-8686-940-4_366$2DOI 100 1 $aLOURENCO, D. 245 $aRecent updates in the BLUPF90 software suite. [366].$h[electronic resource] 260 $aIn: Proceedings of the World Congress on Genetics Applied to Livestock Production (WCGALP), 12., Rotterdam, the Netherlands, 3-8 July 2022. doi: https://doi.org/10.3920/978-90-8686-940-4_366$c8686 300 $a1530-1533. 500 $aArticle history: Published online: February 9, 2023. -- Corresponding author: D. Lourenco, email: danilino@uga.edu 520 $aABSTRACT.- BLUPF90 is a flexible software suite that estimates variance components, cross-classified and covariate effects, breeding values, accuracies, and SNP effects, among others. It is based on mixed models and focuses mainly on animal breeding and genetics applications. This collection of software is continually under development to incorporate new methods and algorithms, improve efficiency, and broaden usage. A significant change undergoing BLUPF90 is the merge of variance components and breeding values estimation software. Some of the recent developments include the implementation of p-values for SNP effects in single-step GWAS, a new algorithm to approximate reliability or accuracy of GEBV, the inclusion of metafounders or unknown parent groups in ssGBLUP to set the base populations, and several optimizations to speed up computing time with many genotyped animals. BLUPF90 is a resourceful collection of efficient software that handles millions of genotyped animals and dozens of millions of records or individuals in pedigree. 653 $aBLUP program 653 $aBLUPF90 software 700 1 $aTSURUTA, S. 700 1 $aAGUILAR, I. 700 1 $aMASUDA, Y. 700 1 $aBERMANN, M. 700 1 $aLEGARRA, A. 700 1 $aMISZTAL, I.
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INIA Las Brujas (LB) |
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1. | | SEIXAS, J.N.; SANGIMINO, J.; GIANNITTI, F.; DORSCH, M.; CESAR, D.; RABENECK, D.M.; SILVA-FLANNERY, L.; FAIR, P.; RITTER, J.M. Identification of unexpected Mycobateria in feline and canine cutaneous lesions by PCR on formalin-fixed paraffin-embedded tissues. [abstract]. In: ACVP (Annual Meeting, American College of Veterinary Pathologists) and ASVCP (American Society for Veterinary Clinical Pathology) Annual Meeting, Boston, Massachusetts, USA. November 12-15, 2022.Tipo: Abstracts/Resúmenes |
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